RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
SMAD9-201ENST00000350148 RUNX1Q01196 453 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 MRPL20Q9BYC9 149 aaKnown RBP10.09□□□□□ -0.79
SMAD9-201ENST00000350148 M0R1W7 72 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 PAGE4O60829 102 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 GPHA2Q96T91 129 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 OR4C46A6NHA9 309 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 LILRA1O75019 489 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 MOSP00540 346 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 CSN3P07498 182 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 LAMTOR2Q9Y2Q5 125 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 UTRNP46939 3433 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 MSGN1A6NI15 193 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 SUPT4H1P63272 117 aaKnown RBP10.09□□□□□ -0.79
SMAD9-201ENST00000350148 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 IFI27L2Q9H2X8 130 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 CEP192Q8TEP8 1941 aa10.09□□□□□ -0.79
SMAD9-201ENST00000350148 IGHV3-72A0A0B4J1Y9 119 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 DNLZQ5SXM8 178 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
SMAD9-201ENST00000350148 CGAP01215 116 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 APCSP02743 223 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 LINC00869P0C866 280 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 SVILO95425 2214 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 UBE2CO00762 179 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 MINOS1Q5TGZ0 78 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 RNF144BQ7Z419 303 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 ERASQ7Z444 233 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 CDC42EP3Q9UKI2 254 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 MINOS1-NBL1R4GNA1 71 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 IGKV1D-17A0A075B6S4 117 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 EGR1P18146 543 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 FXYD3Q14802 87 aa10.08□□□□□ -0.8
SMAD9-201ENST00000350148 RNF166Q96A37 237 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-201ENST00000350148 LYL1P12980 280 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-201ENST00000350148 ECSCRQ19T08 205 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 OR8A1Q8NGG7 326 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 COQ2Q96H96 371 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 UNQ5815/PRO19632Q6UWF5 114 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 A0A1W2PS18 150 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 TPTE2P1Q5T6R2 138 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 E7EQL1 145 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 CCL3L1P16619 93 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 GNLYP22749 145 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 RND2P52198 227 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 ZNF525Q8N782 197 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
SMAD9-201ENST00000350148 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 ADAMTS9Q9P2N4 1935 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 TEX36Q5VZQ5 186 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 SSC4DQ8WTU2 575 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-201ENST00000350148 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 PRCDQ00LT1 54 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 ZNF503-AS2A6NEH8 195 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 AGAP20933 346 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 WDR25Q64LD2 544 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-201ENST00000350148 MRPL54Q6P161 138 aaKnown RBP10.06□□□□□ -0.8
SMAD9-201ENST00000350148 NPCDR1Q9BY65 106 aa10.06□□□□□ -0.8
SMAD9-201ENST00000350148 HERVK_113P61574 105 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 MIC13Q5XKP0 118 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM208Q9BTX3 173 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 SPTA1P02549 2419 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 GFI1BQ5VTD9 330 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 CYP2G1PQ6ZSU1 146 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 SLC25A48Q6ZT89 311 aaKnown RBP10.05□□□□□ -0.8
SMAD9-201ENST00000350148 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 PCNX2A6NKB5 2137 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 MPDZO75970 2070 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 COLCA2A8K830 154 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 TFPI2P48307 235 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 C14orf144Q96I85 54 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 CARHSP1Q9Y2V2 147 aaKnown RBP10.05□□□□□ -0.8
SMAD9-201ENST00000350148 CACNA1HO95180 2353 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 NBR2O15453 112 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 COX6CP09669 75 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-201ENST00000350148 VKORC1L1Q8N0U8 176 aa10.05□□□□□ -0.8
SMAD9-201ENST00000350148 H0YIZ8 118 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 FAM157CP0CG43 387 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 CDKN1AP38936 164 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 ID1P41134 155 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms