RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TMEM144Q7Z5S9 345 aa14.82□□□□□ -0.04
PTN-201ENST00000348225 OR1L6Q8NGR2 347 aa14.82□□□□□ -0.04
PTN-201ENST00000348225 MGST2Q99735 147 aa14.82□□□□□ -0.04
PTN-201ENST00000348225 SSX3Q99909 188 aa14.82□□□□□ -0.04
PTN-201ENST00000348225 FOXC2Q99958 501 aa14.82□□□□□ -0.04
PTN-201ENST00000348225 H2AFB1P0C5Y9 115 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 RAB2AP61019 212 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 GAMTQ14353 236 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 FFAR4Q5NUL3 377 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 COMMD1Q8N668 190 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 MISP3Q96FF7 219 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 RBM14Q96PK6 669 aaKnown RBP14.81□□□□□ -0.04
PTN-201ENST00000348225 SLC25A33Q9BSK2 321 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 RPRMQ9NS64 109 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 MOB4Q9Y3A3 225 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 MAP1AP78559 2803 aaPredicted RBP14.81□□□□□ -0.04
PTN-201ENST00000348225 NAV3Q8IVL0 2385 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 ACSM6Q6P461 480 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 UQCC3Q6UW78 93 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 LFNGQ8NES3 379 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 WFDC11Q8NEX6 87 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 GGTLC1Q9BX51 225 aa14.81□□□□□ -0.04
PTN-201ENST00000348225 IGHV7-81A0A0B4J1V7 117 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 BTBD17A6NE02 478 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 I3L521 148 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 HBE1P02100 147 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 DEFA4P12838 97 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 CTRB1P17538 263 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 ACOT6Q3I5F7 207 aaPredicted RBP14.8□□□□□ -0.04
PTN-201ENST00000348225 CTRB2Q6GPI1 263 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 PIFOQ8TCI5 191 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 C22orf15Q8WYQ4 148 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 FAM103A1Q9BTL3 118 aaKnown RBP14.8□□□□□ -0.04
PTN-201ENST00000348225 VSIRQ9H7M9 311 aa14.8□□□□□ -0.04
PTN-201ENST00000348225 PRRC2AP48634 2157 aaKnown RBP14.79□□□□□ -0.04
PTN-201ENST00000348225 ANKRD34BA5PLL1 514 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 AGPAT2O15120 278 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 CYB5BO43169 146 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 C5orf56Q8N8D9 126 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 WNT10AQ9GZT5 417 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 FNDC4Q9H6D8 234 aaPredicted RBP14.79□□□□□ -0.04
PTN-201ENST00000348225 PITPNC1Q9UKF7 332 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 PXMP4Q9Y6I8 212 aa14.79□□□□□ -0.04
PTN-201ENST00000348225 NPIPB5A8MRT5 1133 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 H3BUX3 64 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 CRYGCP07315 174 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 M6PRP20645 277 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 MFAP2P55001 183 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 NDPQ00604 133 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 MLANAQ16655 118 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 OR10G4Q8NGN3 311 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 OR10G9Q8NGN4 311 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 OR10G7Q8NGN6 311 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 ACY3Q96HD9 319 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 BAHCC1Q9P281 2608 aa14.78□□□□□ -0.04
PTN-201ENST00000348225 SVEP1Q4LDE5 3571 aa14.77□□□□□ -0.04
PTN-201ENST00000348225 FSHBP01225 129 aa14.77□□□□□ -0.04
PTN-201ENST00000348225 RPL29P47914 159 aaKnown RBP14.77□□□□□ -0.04
PTN-201ENST00000348225 TMEM219Q86XT9 240 aa14.77□□□□□ -0.04
PTN-201ENST00000348225 OR2T6Q8NHC8 308 aa14.77□□□□□ -0.04
PTN-201ENST00000348225 SFT2D1Q8WV19 159 aa14.77□□□□□ -0.04
PTN-201ENST00000348225 RCC1LQ96I51 464 aaKnown RBP14.77□□□□□ -0.04
PTN-201ENST00000348225 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.04
PTN-201ENST00000348225 B2MP61769 119 aa14.77□□□□□ -0.05
PTN-201ENST00000348225 C19orf35Q6ZS72 473 aa14.77□□□□□ -0.05
PTN-201ENST00000348225 TTC9CQ8N5M4 171 aa14.77□□□□□ -0.05
PTN-201ENST00000348225 MBD3L1Q8WWY6 194 aa14.77□□□□□ -0.05
PTN-201ENST00000348225 ACTR3CQ9C0K3 210 aaPredicted RBP14.77□□□□□ -0.05
PTN-201ENST00000348225 TRAV1-1A0A0B4J248 108 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 A6NDX4 124 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 TOR2AQ5JU69 321 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 MIC13Q5XKP0 118 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 C16orf82Q7Z2V1 217 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 TEX29Q8N6K0 151 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 STPG3Q8N7X2 389 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 HSPB9Q9BQS6 159 aa14.76□□□□□ -0.05
PTN-201ENST00000348225 CTXND1A0A1B0GTU2 59 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 A0A1B0GV50 99 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 M0QZK8 103 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 MT-CO2P00403 227 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 OR10J1P30954 320 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 ZNF726P1Q15940 193 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 ASPHD1Q5U4P2 390 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 SPSB3Q6PJ21 355 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 C9orf139Q6ZV77 190 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 RPP25LQ8N5L8 163 aaKnown RBP14.75□□□□□ -0.05
PTN-201ENST00000348225 THAP8Q8NA92 274 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 SGMS2Q8NHU3 365 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 NPIPB3Q92617 1050 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 PBDC1Q9BVG4 233 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 SLC39A9Q9NUM3 307 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 SLC45A2Q9UMX9 530 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 DMRT1Q9Y5R6 373 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 CREBBPQ92793 2442 aa14.75□□□□□ -0.05
PTN-201ENST00000348225 IGKV1OR2-108A0A075B7D4 117 aa14.74□□□□□ -0.05
PTN-201ENST00000348225 MAP1LC3B2A6NCE7 125 aa14.74□□□□□ -0.05
PTN-201ENST00000348225 KRBOX1C9JBD0 128 aa14.74□□□□□ -0.05
PTN-201ENST00000348225 RND2P52198 227 aa14.74□□□□□ -0.05
PTN-201ENST00000348225 PRR20EP86478 221 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms