RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LGI3Q8N145 548 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 TUBA4BQ9H853 241 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 CENPXA8MT69 81 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 K7EIM0 57 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 NDUFA4O00483 81 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 GNG7O60262 68 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 P0C879 139 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 ZNF79Q15937 498 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 DEFB114Q30KQ6 69 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 CD300EQ496F6 205 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 TMED4Q7Z7H5 227 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 OR52E5Q8NH55 327 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 TRIM63Q969Q1 353 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 HEYLQ9NQ87 328 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 MRPL27Q9P0M9 148 aaKnown RBP11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
TSPAN4-201ENST00000346501 IGHV3-35A0A0C4DH35 117 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 MT-CO2P00403 227 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 MFAP2P55001 183 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 ANKRD55Q3KP44 614 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 TMEM128Q5BJH2 165 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 ASCL2Q99929 193 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 HIPK2Q9H2X6 1198 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 ZMAT4Q9H898 229 aa11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-201ENST00000346501 A0A0B4J2A0 478 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 RPS10-NUDT3A0A1W2PQS6 291 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 YIF1AO95070 293 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 VAMP1P23763 118 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 HTR2BP41595 481 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 TMEM187Q14656 261 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 RBMS2Q15434 407 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
TSPAN4-201ENST00000346501 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 TMEM213A2RRL7 107 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 I3L2K1 104 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 IGHV4-30-4P0DP06 118 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 FCGR2BP31994 310 aaPredicted RBP11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 BMI1P35226 326 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 OPRK1P41145 380 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 CCR6P51684 374 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 CD81P60033 236 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 LAMTOR1Q6IAA8 161 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 CENPSQ8N2Z9 138 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 LHFPL5Q8TAF8 219 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 SRRQ9GZT4 340 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 U3KQK5 164 aa11.94□□□□□ -0.5
TSPAN4-201ENST00000346501 A0A0G2JRQ6 117 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 DUXBA0A1W2PPF3 345 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 K7EMT4 169 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 Q8N1Y9 231 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 NEURL2Q9BR09 285 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 GINS3Q9BRX5 216 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
TSPAN4-201ENST00000346501 IZUMO1RA6ND01 250 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 C15orf62A8K5M9 175 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 A8MZ25 164 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 CTSGP08311 255 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 RNASE2P10153 161 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 Q6ZRM9 215 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 OR1S1Q8NH92 325 aa11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 C7orf50Q9BRJ6 194 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-201ENST00000346501 A0A1B0GU03 582 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 UBE2MP61081 183 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 TMEM61Q8N0U2 210 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 WDR89Q96FK6 387 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 MLXQ9UH92 298 aa11.91□□□□□ -0.5
TSPAN4-201ENST00000346501 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms