RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 A0A087WWC5 75 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ODF3BA8MYP8 253 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 OR2C1O95371 312 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CXorf1O96002 111 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 IGHV2-5P01817 119 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CEACAM3P40198 252 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 UBE2G2P60604 165 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 LINC00518Q8N0U6 118 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FAM24BQ8N5W8 94 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 RPUSD4Q96CM3 377 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP1-202ENST00000346416 A0A1W2PRD5 423 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 A0A1W2PRF3 423 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 A0A1W2PRM7 423 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 VENTXO95231 258 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 RAB5AP20339 215 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MAS1LP35410 378 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 COMPP49747 757 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 GNB1P62873 340 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PNRC1Q12796 327 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 RNF5Q99942 180 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
CDK5RAP1-202ENST00000346416 OVOL3O00110 214 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 APELAP0DMC3 54 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 AREGP15514 252 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 AKR1D1P51857 326 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SVEP1Q4LDE5 3571 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 B4DEV8 164 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 LCN2P80188 198 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 KIR3DL3Q8N743 410 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 IGFBPL1Q8WX77 278 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CFHR4Q92496 578 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 BPESC1Q9GZL8 116 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PARLQ9H300 379 aa11.3□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FCN1O00602 326 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 S100A6P06703 90 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ATP5G3P48201 142 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PLGLAQ15195 96 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FOXH1O75593 365 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 GCHFRP30047 84 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MMDQ15546 238 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
CDK5RAP1-202ENST00000346416 TEX22C9J3V5 150 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 NPPCP23582 126 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 CD24P25063 80 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MFAP2P55001 183 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PAX2Q02962 417 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SSX2Q16385 188 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 TMEM241Q24JQ0 296 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 C19orf35Q6ZS72 473 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 ABCA1O95477 2261 aa11.28□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PDE6DO43924 150 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MT-CO2P00403 227 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 LMO4P61968 165 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MISP3Q96FF7 219 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 SIRPDQ9H106 197 aa11.27□□□□□ -0.6
CDK5RAP1-202ENST00000346416 MOSP00540 346 aa11.27□□□□□ -0.61
CDK5RAP1-202ENST00000346416 IGHV4-39P01824 125 aa11.27□□□□□ -0.61
CDK5RAP1-202ENST00000346416 ADIRFQ15847 76 aa11.27□□□□□ -0.61
CDK5RAP1-202ENST00000346416 OR1P1Q8NH06 330 aa11.27□□□□□ -0.61
CDK5RAP1-202ENST00000346416 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms