RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZP3P21754 424 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 HTR2BP41595 481 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 RPP30P78346 268 aaKnown RBP9.18□□□□□ -0.94
SNCA-202ENST00000345009 TNFRSF9Q07011 255 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 ZNF616Q08AN1 781 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 ZNF114Q8NC26 417 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 CIB3Q96Q77 187 aaPredicted RBP9.18□□□□□ -0.94
SNCA-202ENST00000345009 GNB4Q9HAV0 340 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
SNCA-202ENST00000345009 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
SNCA-202ENST00000345009 WRBO00258 174 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 TSPAN15O95858 294 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 TATDN3Q17R31 274 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 RGS21Q2M5E4 152 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 ZNF343Q6P1L6 599 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 OR52B4Q8NGK2 314 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 VN1R17PQ8TDU5 208 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 RAX2Q96IS3 184 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 P2RX4Q99571 388 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 PEF1Q9UBV8 284 aaKnown RBP9.17□□□□□ -0.94
SNCA-202ENST00000345009 U3KQ87 197 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
SNCA-202ENST00000345009 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 LINC01619G3V211 115 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 PITX3O75364 302 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 ADAP1O75689 374 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 NDUFB8O95169 186 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 IFNA10P01566 189 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 EXOSC2Q13868 293 aaKnown RBP9.16□□□□□ -0.94
SNCA-202ENST00000345009 IAH1Q2TAA2 248 aaPredicted RBP9.16□□□□□ -0.94
SNCA-202ENST00000345009 C18orf65Q6ZTR6 163 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 DTD1Q8TEA8 209 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 ATP6V0BQ99437 205 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
SNCA-202ENST00000345009 GPR61Q9BZJ8 451 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 GSKIPQ9P0R6 139 aa9.16□□□□□ -0.94
SNCA-202ENST00000345009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.15□□□□□ -0.94
SNCA-202ENST00000345009 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 ANKRD34BA5PLL1 514 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 SYNGR2O43760 224 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 SSNA1O43805 119 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 SCGB2A1O75556 95 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 NXPH3O95157 252 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 NKX2-1P43699 371 aaPredicted RBP9.15□□□□□ -0.94
SNCA-202ENST00000345009 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 GSG1LQ6UXU4 331 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 SLC24A4Q8NFF2 622 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 RBKSQ9H477 322 aa9.15□□□□□ -0.94
SNCA-202ENST00000345009 RPS10-NUDT3A0A1W2PQS6 291 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 CLEC3BP05452 202 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 NPY1RP25929 384 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 NPBWR1P48145 328 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 RAB11AP62491 216 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 ID3Q02535 119 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 FHL3Q13643 280 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 RPEL1Q2QD12 228 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 C2orf83Q53S99 150 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 ETFRF1Q6IPR1 90 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 WFDC9Q8NEX5 89 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 RNASEH2CQ8TDP1 164 aaKnown RBP9.14□□□□□ -0.95
SNCA-202ENST00000345009 PINX1Q96BK5 328 aaKnown RBP9.14□□□□□ -0.95
SNCA-202ENST00000345009 C2orf50Q96LR7 162 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 DUX3Q96PT4 197 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 TXN2Q99757 166 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 C21orf62Q9NYP8 219 aa9.14□□□□□ -0.95
SNCA-202ENST00000345009 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 IGHV4OR15-8A0A075B7B6 117 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 A0A087WW49 117 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 GGCTO75223 188 aaKnown RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 IFNA4P05014 189 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 RNASE2P10153 161 aaKnown RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 ARL3P36405 182 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 MFAP4P55083 255 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 CYCSP99999 105 aaKnown RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 Q56UQ5 140 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 ETV3LQ6ZN32 361 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 SCARB1Q8WTV0 552 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 BSCL2Q96G97 398 aaPredicted RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 RCC1LQ96I51 464 aaKnown RBP9.13□□□□□ -0.95
SNCA-202ENST00000345009 RAB40CQ96S21 281 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 ELOVL1Q9BW60 279 aa9.13□□□□□ -0.95
SNCA-202ENST00000345009 MPTX1A8MV57 137 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 MT-CO2P00403 227 aa9.12□□□□□ -0.95
SNCA-202ENST00000345009 SLC25A4P12235 298 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms