RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 HEATR5AQ86XA9 2040 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 PDZD11Q5EBL8 140 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 MLNRO43193 412 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 EFNB3Q15768 340 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 RAB24Q969Q5 203 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 SOD3P08294 240 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 MPZP25189 248 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 TMEM218A2RU14 115 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 C19orf35Q6ZS72 473 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 GPR82Q96P67 336 aa13.55□□□□□ -0.24
SMARCA4-201ENST00000344626 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 NAT1P18440 290 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 HIST1H1AQ02539 215 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 SRD5A3Q9H8P0 318 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 PSPNO60542 156 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 IL6RP08887 468 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 CD69Q07108 199 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 TMPRSS5Q9H3S3 457 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 CXCL2P19875 107 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 PSMB11A5LHX3 300 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 PMCHP20382 165 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 MEF2BQ02080 365 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 IGHV1-3A0A0C4DH29 117 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 ARL14EPLP0DKL9 152 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 CX3CL1P78423 397 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 RHOGP84095 191 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 SIGIRRQ6IA17 410 aa13.54□□□□□ -0.24
SMARCA4-201ENST00000344626 SAPCD1Q5SSQ6 148 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 Q8TCH9 128 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 ZNF843Q8N446 348 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 TMEM116Q8NCL8 245 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 ZNF257Q9Y2Q1 563 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 H3BQ15 152 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 H2BFSP57053 126 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 KRTDAPP60985 99 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 TWIST1Q15672 202 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 PVRIGQ6DKI7 326 aa13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 TRAF4Q9BUZ4 470 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-201ENST00000344626 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 FUT9Q9Y231 359 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 C5orf63A6NC05 138 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 NDUFB4O95168 129 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 CD8AP01732 235 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 PRTN3P24158 256 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 GATA4P43694 442 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 Q8NA96 180 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 PHLDA3Q9Y5J5 127 aa13.52□□□□□ -0.24
SMARCA4-201ENST00000344626 AWAT1Q58HT5 328 aa13.52□□□□□ -0.25
SMARCA4-201ENST00000344626 ZNF329Q86UD4 541 aa13.52□□□□□ -0.25
SMARCA4-201ENST00000344626 IGKV1D-17A0A075B6S4 117 aa13.52□□□□□ -0.25
SMARCA4-201ENST00000344626 ZNF705AQ6ZN79 300 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-201ENST00000344626 NR2C2APQ86WQ0 139 aa13.52□□□□□ -0.25
SMARCA4-201ENST00000344626 TRBV6-6A0A0A6YYG2 114 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 FAM181BA6NEQ2 426 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 AMY1AP04745 511 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 MRPL54Q6P161 138 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 ZNF600Q6ZNG1 722 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 CEP350Q5VT06 3117 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 SAA4P35542 130 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 FAM159AQ6UWV7 190 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 C11orf42Q8N5U0 333 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 DMRTA2Q96SC8 542 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 NPCDR1Q9BY65 106 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 ABCA12Q86UK0 2595 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 BUB1B-PAK6H3BSN5 160 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 IGLV1-44P01699 117 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 RUSC1-AS1Q66K80 236 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 FAM24BQ8N5W8 94 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 CLRN3Q8NCR9 226 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 DCAF16Q9NXF7 216 aa13.51□□□□□ -0.25
SMARCA4-201ENST00000344626 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 FHL1Q13642 323 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 ZNF660Q6AZW8 331 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 Q6P435 159 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 NPIPB6E9PJ23 425 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 ANOS1P23352 680 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 USP9XQ93008 2570 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 IGFBP2P18065 325 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 CMC4P56277 68 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 IBA57Q5T440 356 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 J3QLI3 93 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 GCHFRP30047 84 aa13.5□□□□□ -0.25
SMARCA4-201ENST00000344626 GFI1Q99684 422 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 923.9 ms