RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 S1PR3Q99500 378 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 LY96Q9Y6Y9 160 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 APOA2P02652 100 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 GNG5P63218 68 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 OR9G1Q8NH87 305 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 GOSR1O95249 250 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 SLC25A34Q6PIV7 304 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 C1orf229Q6ZS94 237 aaPredicted RBP12.2□□□□□ -0.46
CLCN1-201ENST00000343257 IGKV1OR2-108A0A075B7D4 117 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 SPINT2O43291 252 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 REG1AP05451 166 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 ZNF134P52741 427 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
CLCN1-201ENST00000343257 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 TMEM167BQ9NRX6 74 aa12.2□□□□□ -0.46
CLCN1-201ENST00000343257 ZFHX4Q86UP3 3567 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 PPOXP50336 477 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
CLCN1-201ENST00000343257 SPEM1Q8N4L4 309 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 MRPL27Q9P0M9 148 aaKnown RBP12.19□□□□□ -0.46
CLCN1-201ENST00000343257 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 PPIAL4DF5H284 164 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 DUSP13Q9UII6 198 aa12.19□□□□□ -0.46
CLCN1-201ENST00000343257 VWC2LB2RUY7 222 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 FABP6P51161 128 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 TBC1D28Q2M2D7 210 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 KLF13Q9Y2Y9 288 aaPredicted RBP12.18□□□□□ -0.46
CLCN1-201ENST00000343257 IGHV3OR15-7A0A075B7D8 119 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 TMEM238C9JI98 176 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 TOX4O94842 621 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PRR20EP86478 221 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PRR20CP86479 221 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PRR20DP86480 221 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PRR20BP86481 221 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PRR20AP86496 221 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 NRN1LQ496H8 165 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 IGF2BP2-AS1Q96M15 143 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 LYZL6O75951 148 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 RHOGP84095 191 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 PLGLB1Q02325 96 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 COX19Q49B96 90 aa12.18□□□□□ -0.46
CLCN1-201ENST00000343257 DYSFO75923 2080 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 IGKV3D-15A0A087WSY6 115 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 H3BTX0 84 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 SMPD2O60906 423 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 AGFG2O95081 481 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 SP1P08047 785 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 TMEM11P17152 192 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 ABCA1O95477 2261 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 CD46P15529 392 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 CHRDL1Q9BU40 450 aa12.17□□□□□ -0.46
CLCN1-201ENST00000343257 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 ZNF766Q5HY98 468 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 ACP7Q6ZNF0 438 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 PPP1R32Q7Z5V6 425 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 CORO2AQ92828 525 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 SPOCK3Q9BQ16 436 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
CLCN1-201ENST00000343257 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 K7ERU9 68 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 IGFBP4P22692 258 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 BOKQ9UMX3 212 aaPredicted RBP12.16□□□□□ -0.46
CLCN1-201ENST00000343257 DCHS1Q96JQ0 3298 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 C11orf53Q8IXP5 236 aa12.16□□□□□ -0.46
CLCN1-201ENST00000343257 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 TMEM116Q8NCL8 245 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 CFIP05156 583 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
CLCN1-201ENST00000343257 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 NANOS1Q8WY41 292 aaKnown RBP12.15□□□□□ -0.46
CLCN1-201ENST00000343257 RAB37Q96AX2 223 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 DEFB127Q9H1M4 99 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
CLCN1-201ENST00000343257 GAGE10A6NGK3 116 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 KLF14Q8TD94 323 aaPredicted RBP12.14□□□□□ -0.47
CLCN1-201ENST00000343257 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 C7orf71A4D174 169 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 C21orf140B9A014 251 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
CLCN1-201ENST00000343257 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 CADP27708 2225 aa12.14□□□□□ -0.47
CLCN1-201ENST00000343257 C15orf61A6NNL5 157 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms