RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 OR1L8Q8NGR8 309 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 KALRNO60229 2985 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
TPM3-208ENST00000341485 PPP5D1E7EU14 171 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 GOSR1O95249 250 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 CD99P14209 185 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 DLX6P56179 175 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 GAMTQ14353 236 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 MLANAQ16655 118 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 NABP2Q9BQ15 211 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
TPM3-208ENST00000341485 ACTL6BO94805 426 aa12.13□□□□□ -0.47
TPM3-208ENST00000341485 FSTL3O95633 263 aa12.13□□□□□ -0.47
TPM3-208ENST00000341485 ATP5IP56385 69 aaPredicted RBP12.13□□□□□ -0.47
TPM3-208ENST00000341485 FAM78BQ5VT40 261 aa12.13□□□□□ -0.47
TPM3-208ENST00000341485 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
TPM3-208ENST00000341485 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
TPM3-208ENST00000341485 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
TPM3-208ENST00000341485 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
TPM3-208ENST00000341485 E7EUB6 86 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 TYMSP04818 313 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 OR10J1P30954 320 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 FAM3BP58499 235 aaPredicted RBP12.12□□□□□ -0.47
TPM3-208ENST00000341485 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
TPM3-208ENST00000341485 PITPNC1Q9UKF7 332 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 ABCA4P78363 2273 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 MT-CO2P00403 227 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
TPM3-208ENST00000341485 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 KCNIP4Q6PIL6 250 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 C8orf31Q8N9H6 132 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 ST6GALNAC6Q969X2 333 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 FUT9Q9Y231 359 aa12.12□□□□□ -0.47
TPM3-208ENST00000341485 FABP4P15090 132 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 CD69Q07108 199 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 OR9G1Q8NH87 305 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 TMEM167AQ8TBQ9 72 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 TMEM186Q96B77 213 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 SFRP2Q96HF1 295 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 CHODLQ9H9P2 273 aa12.11□□□□□ -0.47
TPM3-208ENST00000341485 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 HNF1AP20823 631 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
TPM3-208ENST00000341485 IL3RAP26951 378 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 OR4C13Q8NGP0 309 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 MDFIC2A0A1B0GVS7 189 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 C10orf55Q5SWW7 151 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 ZNF503Q96F45 646 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
TPM3-208ENST00000341485 A0A087X0M5 115 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 TRBV23-1A0A0A0MS06 115 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 A0A1B0GX30 115 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 OR5G3P0C626 314 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 AREGP15514 252 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 ZNF137PP52743 207 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 LCN2P80188 198 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 ERHP84090 104 aaKnown RBP12.09□□□□□ -0.47
TPM3-208ENST00000341485 PSG5Q15238 335 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 WASHC3Q9Y3C0 194 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 IGHV1-8P0DP01 117 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 C11orf42Q8N5U0 333 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 OR2T6Q8NHC8 308 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
TPM3-208ENST00000341485 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
TPM3-208ENST00000341485 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
TPM3-208ENST00000341485 A0A1W2PN81 502 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 K7EN84 100 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 NDUFS7O75251 213 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 GPR6P46095 362 aaPredicted RBP12.08□□□□□ -0.48
TPM3-208ENST00000341485 EFNA4P52798 201 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
TPM3-208ENST00000341485 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 PNKDQ8N490 385 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 TMEM167BQ9NRX6 74 aa12.08□□□□□ -0.48
TPM3-208ENST00000341485 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms