RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RBMY1DP0C7P1 496 aaKnown RBP15.13■□□□□ 0.01
SYNE2-201ENST00000341472 PRCDQ00LT1 54 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 SCGB2B2Q4G0G5 96 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 CASC10Q5T4H9 136 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 CCDC71LQ8N9Z2 235 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 DEDD2Q8WXF8 326 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 MISP3Q96FF7 219 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 TP53RKQ96S44 253 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 CHRDL1Q9BU40 450 aa15.13■□□□□ 0.01
SYNE2-201ENST00000341472 F8W735 103 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-201ENST00000341472 NDUFA4O00483 81 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 IL7P13232 177 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 MFAP4P55083 255 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 BAK1Q16611 211 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 IZUMO4Q1ZYL8 232 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 SP6Q3SY56 376 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 C20orf24Q9BUV8 137 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 WFDC10AQ9H1F0 79 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 C5orf66Q9H5L9 145 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 EDA2RQ9HAV5 297 aa15.12■□□□□ 0.01
SYNE2-201ENST00000341472 A0A0B4J293 547 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 ANKRD20A5PA0PJZ0 165 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 K7EMT4 169 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 IGKV1-5P01602 117 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 CTSGP08311 255 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 ADMP35318 185 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 MEF2DQ14814 521 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 TRIM16LQ309B1 348 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 TOMM5Q8N4H5 51 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 OR13C8Q8NGS7 320 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 MARCH1Q8TCQ1 289 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 TRIM63Q969Q1 353 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 TXN2Q99757 166 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 HIPK2Q9H2X6 1198 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 DAZ1Q9NQZ3 744 aaKnown RBP15.11■□□□□ 0.01
SYNE2-201ENST00000341472 RYR3Q15413 4870 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 DNAH7Q8WXX0 4024 aa15.11■□□□□ 0.01
SYNE2-201ENST00000341472 I3L2K1 104 aa15.1■□□□□ 0.01
SYNE2-201ENST00000341472 NUPL2O15504 423 aaKnown RBP15.1■□□□□ 0.01
SYNE2-201ENST00000341472 UPK1BO75841 260 aa15.1■□□□□ 0.01
SYNE2-201ENST00000341472 CTSDP07339 412 aaPredicted RBP15.1■□□□□ 0.01
SYNE2-201ENST00000341472 AKR1C2P52895 323 aa15.1■□□□□ 0.01
SYNE2-201ENST00000341472 LAMTOR1Q6IAA8 161 aa15.1■□□□□ 0.01
SYNE2-201ENST00000341472 ZNF114Q8NC26 417 aa15.1■□□□□ 0.01
SYNE2-201ENST00000341472 RRNAD1Q96FB5 475 aaKnown RBP15.1■□□□□ 0.01
SYNE2-201ENST00000341472 DISC1C4P0D8 188 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 B3GALNT1O75752 331 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 MT-CO2P00403 227 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 IFNA17P01571 189 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 P0C879 139 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 AKAIN1P0CW23 69 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 FAUP35544 74 aaKnown RBP15.09■□□□□ 0.01
SYNE2-201ENST00000341472 SNCAP37840 140 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 RELQ04864 619 aaPredicted RBP15.09■□□□□ 0.01
SYNE2-201ENST00000341472 SPINK9Q5DT21 86 aa15.09■□□□□ 0.01
SYNE2-201ENST00000341472 IGHV3OR16-8A0A075B7F1 116 aa15.08■□□□□ 0
SYNE2-201ENST00000341472 ZNF207O43670 478 aaKnown RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 UCP1P25874 307 aa15.08■□□□□ 0
SYNE2-201ENST00000341472 FCGR2BP31994 310 aaPredicted RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 PINX1Q96BK5 328 aaKnown RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 SPAG8Q99932 426 aaPredicted RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 C7orf50Q9BRJ6 194 aaKnown RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 PDCD10Q9BUL8 212 aa15.08■□□□□ 0
SYNE2-201ENST00000341472 RETNQ9HD89 108 aa15.08■□□□□ 0
SYNE2-201ENST00000341472 C14orf166Q9Y224 244 aaKnown RBP15.08■□□□□ 0
SYNE2-201ENST00000341472 TEX13DA0A0J9YY54 714 aaPredicted RBP15.07■□□□□ 0
SYNE2-201ENST00000341472 C15orf62A8K5M9 175 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 CENPXA8MT69 81 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 TSPAN4O14817 238 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 ST8SIA3O43173 380 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 YIF1AO95070 293 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 IGHV3-48P01763 117 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 KLF9Q13886 244 aaPredicted RBP15.07■□□□□ 0
SYNE2-201ENST00000341472 ZFAND6Q6FIF0 208 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 FAAP20Q6NZ36 180 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 SLC35G3Q8N808 338 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 RNASE11Q8TAA1 199 aaKnown RBP15.07■□□□□ 0
SYNE2-201ENST00000341472 RTBDNQ9BSG5 229 aaPredicted RBP15.07■□□□□ 0
SYNE2-201ENST00000341472 SMPXQ9UHP9 88 aa15.07■□□□□ 0
SYNE2-201ENST00000341472 NAP1L6A6NFF2 107 aa15.06■□□□□ 0
SYNE2-201ENST00000341472 INS-IGF2F8WCM5 200 aa15.06■□□□□ 0
SYNE2-201ENST00000341472 SUB1P53999 127 aaKnown RBP eCLIP15.06■□□□□ 0
SYNE2-201ENST00000341472 SURF2Q15527 256 aaPredicted RBP15.06■□□□□ 0
SYNE2-201ENST00000341472 ENY2Q9NPA8 101 aa15.06■□□□□ 0
SYNE2-201ENST00000341472 LOC102724200A0A096LPH7 203 aaPredicted RBP15.05■□□□□ -0
SYNE2-201ENST00000341472 GNG7O60262 68 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 CDS2O95674 445 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 NPBWR1P48145 328 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 DEFA1P59665 94 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 DEFA3P59666 94 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 DUSP18Q8NEJ0 188 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 FAM110AQ9BQ89 295 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 GGTLC1Q9BX51 225 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 TMEM222Q9H0R3 208 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 NAA60Q9H7X0 242 aa15.05■□□□□ -0
SYNE2-201ENST00000341472 OR5AC1P0C628 307 aa15.04■□□□□ -0
SYNE2-201ENST00000341472 DHODHQ02127 395 aa15.04■□□□□ -0
SYNE2-201ENST00000341472 OR4C16Q8NGL9 310 aa15.04■□□□□ -0
SYNE2-201ENST00000341472 GLYATL2Q8WU03 294 aa15.04■□□□□ -0
SYNE2-201ENST00000341472 PRRT1Q99946 306 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms