RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HLA-DRB3P79483 266 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 ZNF79Q15937 498 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 KCTD21Q4G0X4 260 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 RBM48Q5RL73 367 aaKnown RBP7.06□□□□□ -1.28
ATXN3-201ENST00000340660 DDI2Q5TDH0 399 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 FAM220AQ7Z4H9 259 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 C10orf126Q8N4M7 172 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 OR13F1Q8NGS4 319 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 FAAP24Q9BTP7 215 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 NOP10Q9NPE3 64 aaKnown RBP7.06□□□□□ -1.28
ATXN3-201ENST00000340660 ZNF446Q9NWS9 450 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 GHRLQ9UBU3 117 aa7.06□□□□□ -1.28
ATXN3-201ENST00000340660 RCL1Q9Y2P8 373 aaKnown RBP7.06□□□□□ -1.28
ATXN3-201ENST00000340660 A0A1B0GU03 582 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 PRKYO43930 277 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 ADAP1O75689 374 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 MGMTP16455 207 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 ZNF85Q03923 595 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 GPR176Q14439 515 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 OR2B11Q5JQS5 317 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 PLAC9Q5JTB6 97 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 OR2G6Q5TZ20 316 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 WDR93Q6P2C0 686 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 OR10G2Q8NGC3 310 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 ADTRPQ96IZ2 230 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 FEVQ99581 238 aa7.05□□□□□ -1.28
ATXN3-201ENST00000340660 SAMHD1Q9Y3Z3 626 aaKnown RBP7.05□□□□□ -1.28
ATXN3-201ENST00000340660 TIMM8BQ9Y5J9 83 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-201ENST00000340660 USH2AO75445 5202 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 A0A0D9SG52 128 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 M0R129 80 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 CYB5BO43169 146 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 SERPINE2P07093 398 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 OR2T7P0C7T2 308 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 NPPCP23582 126 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 PRR4Q16378 134 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 IBA57Q5T440 356 aaKnown RBP7.04□□□□□ -1.28
ATXN3-201ENST00000340660 AADACL4Q5VUY2 407 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 MOB1BQ7L9L4 216 aa7.04□□□□□ -1.28
ATXN3-201ENST00000340660 CHMP1AQ9HD42 196 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-201ENST00000340660 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-201ENST00000340660 HTR1AP08908 422 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 CD3GP09693 182 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 OR13C7P0DN81 318 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 CRYBB3P26998 211 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 TDRG1Q3Y452 100 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 KDM4DQ6B0I6 523 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 FOXI2Q6ZQN5 318 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 C6orf201Q7Z4U5 140 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 HDHD3Q9BSH5 251 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-201ENST00000340660 RIMS4Q9H426 269 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-201ENST00000340660 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
ATXN3-201ENST00000340660 F11RQ9Y624 299 aaKnown RBP7.03□□□□□ -1.28
ATXN3-201ENST00000340660 OGG1O15527 345 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-201ENST00000340660 NXPH3O95157 252 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 IGHV3-48P01763 117 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 RORCP51449 518 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 KLF9Q13886 244 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-201ENST00000340660 FAM78BQ5VT40 261 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 GLIPR1L1Q6UWM5 242 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 ABHD1Q96SE0 405 aa7.02□□□□□ -1.29
ATXN3-201ENST00000340660 IBA57-AS1B1ANH7 110 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 C9JCJ5 164 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 F6UB75 175 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 ANXA8P13928 327 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 PPP5CP53041 499 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 PSME3P61289 254 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 SCPEP1Q9HB40 452 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 TMEM138Q9NPI0 162 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 BABAM2Q9NXR7 383 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 KLK11Q9UBX7 282 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 MGAT4AQ9UM21 535 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 RPH3ALQ9UNE2 315 aa7.01□□□□□ -1.29
ATXN3-201ENST00000340660 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
ATXN3-201ENST00000340660 TRBV6-6A0A0A6YYG2 114 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 I3L2K1 104 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 CRTAPO75718 401 aaPredicted RBP7□□□□□ -1.29
ATXN3-201ENST00000340660 GAGE7O76087 117 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 GAGE12FP0CL80 117 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 GAGE12GP0CL81 117 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 GAGE12IP0CL82 117 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 CELP19835 753 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 GATA2P23769 480 aaPredicted RBP7□□□□□ -1.29
ATXN3-201ENST00000340660 MFAP4P55083 255 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 RPL30P62888 115 aaKnown RBP7□□□□□ -1.29
ATXN3-201ENST00000340660 AMTNQ6UX39 209 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 ZNF600Q6ZNG1 722 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 C9orf47Q6ZRZ4 202 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 MUL1Q969V5 352 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 C16orf74Q96GX8 76 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 METTL26Q96S19 204 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 ZNF184Q99676 751 aaPredicted RBP7□□□□□ -1.29
ATXN3-201ENST00000340660 TXN2Q99757 166 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 ICOSQ9Y6W8 199 aa7□□□□□ -1.29
ATXN3-201ENST00000340660 H0YIZ8 118 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms