RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 DPF1Q92782 380 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 EEF1AKMT3Q96AZ1 226 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 MAGT1Q9H0U3 335 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
SFN-201ENST00000339276 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
SFN-201ENST00000339276 CMYA5Q8N3K9 4069 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.88□□□□□ -0.35
SFN-201ENST00000339276 SNRPGP15A8MWD9 76 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 IAPPP10997 89 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 HTR2BP41595 481 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 ZNF502Q8TBZ5 544 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
SFN-201ENST00000339276 CXorf58Q96LI9 332 aa12.88□□□□□ -0.35
SFN-201ENST00000339276 PPP5D1E7EU14 171 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 I3L2K1 104 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 CD33P20138 364 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 HOXD3P31249 432 aaPredicted RBP12.87□□□□□ -0.35
SFN-201ENST00000339276 SUB1P53999 127 aaKnown RBP eCLIP12.87□□□□□ -0.35
SFN-201ENST00000339276 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 VN1R17PQ8TDU5 208 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 SCARB1Q8WTV0 552 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 TMEM170AQ8WVE7 144 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 GSKIPQ9P0R6 139 aa12.87□□□□□ -0.35
SFN-201ENST00000339276 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 BMPR1BO00238 502 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 SYNGR2O43760 224 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 MED6O75586 246 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 MT-CO2P00403 227 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 NPY1RP25929 384 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
SFN-201ENST00000339276 ID3Q02535 119 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 TATDN3Q17R31 274 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 C2orf83Q53S99 150 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
SFN-201ENST00000339276 C7orf66A4D0T2 115 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 WRBO00258 174 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 GOSR2O14653 212 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 IFNA10P01566 189 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 GPR183P32249 361 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 POLR2GP62487 172 aaKnown RBP eCLIP12.85□□□□□ -0.35
SFN-201ENST00000339276 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 DLX4Q92988 240 aaPredicted RBP12.85□□□□□ -0.35
SFN-201ENST00000339276 ZC4H2Q9NQZ6 224 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 C21orf62Q9NYP8 219 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
SFN-201ENST00000339276 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
SFN-201ENST00000339276 CORTO00230 105 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 CLEC3BP05452 202 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 ZP3P21754 424 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 ARL3P36405 182 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 FAM209BQ5JX69 171 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 FNDC4Q9H6D8 234 aaPredicted RBP12.84□□□□□ -0.35
SFN-201ENST00000339276 U3KQ87 197 aa12.84□□□□□ -0.35
SFN-201ENST00000339276 OR2T8A6NH00 312 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 SSNA1O43805 119 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 SSSCA1O60232 199 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 SIX6O95475 246 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 MBPP02686 304 aaPredicted RBP12.83□□□□□ -0.36
SFN-201ENST00000339276 IGLL1P15814 213 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 OPRK1P41145 380 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 OXA1LQ15070 435 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 Q56UQ5 140 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
SFN-201ENST00000339276 CIB3Q96Q77 187 aaPredicted RBP12.83□□□□□ -0.36
SFN-201ENST00000339276 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
SFN-201ENST00000339276 H3BP45 60 aa12.82□□□□□ -0.36
SFN-201ENST00000339276 GGCTO75223 188 aaKnown RBP12.82□□□□□ -0.36
SFN-201ENST00000339276 MLANAQ16655 118 aa12.82□□□□□ -0.36
SFN-201ENST00000339276 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
SFN-201ENST00000339276 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
SFN-201ENST00000339276 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
SFN-201ENST00000339276 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
SFN-201ENST00000339276 OVOL1O14753 267 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 TGOLN2O43493 480 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 OR2C1O95371 312 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 TMEM50AO95807 157 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 MFAP4P55083 255 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 SYNJ2BPP57105 145 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 KLF5Q13887 457 aaPredicted RBP12.81□□□□□ -0.36
SFN-201ENST00000339276 OXLD1Q5BKU9 147 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 NOXA1Q86UR1 476 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 BSCL2Q96G97 398 aaPredicted RBP12.81□□□□□ -0.36
SFN-201ENST00000339276 RCC1LQ96I51 464 aaKnown RBP12.81□□□□□ -0.36
SFN-201ENST00000339276 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
SFN-201ENST00000339276 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
SFN-201ENST00000339276 G3V4G9 280 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms