RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 NF1P21359 2839 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 KANTRA0A1W2PQU2 76 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 DFFBO76075 338 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 SLC38A11Q08AI6 406 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 ATP6V1FQ16864 119 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 ARPC5LQ9BPX5 153 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 THYN1Q9P016 225 aa11.43□□□□□ -0.58
NIPAL3-202ENST00000339255 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 BCL2L11O43521 198 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 DLK1P80370 383 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 ZNF266Q14584 549 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
NIPAL3-202ENST00000339255 RPS10-NUDT3A0A1W2PQS6 291 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 G3V318 75 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 H3BUA1 57 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 BRI3O95415 125 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 GPX4P36969 197 aaPredicted RBP11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 KLK9Q2XQG4 91 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 Q6ZS46 218 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 HAPLN4Q86UW8 402 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 ATP5SQ99766 215 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 KLK9Q9UKQ9 250 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 ZFHX3Q15911 3703 aa11.41□□□□□ -0.58
NIPAL3-202ENST00000339255 IGLV11-55A0A075B6I3 123 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 BORCS7-ASMTA0A0B4J1R7 106 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 OPRK1P41145 380 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 SLC25A24Q6NUK1 477 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 OR5T1Q8NG75 326 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
NIPAL3-202ENST00000339255 JMJD1CQ15652 2540 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 JTBO76095 146 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 MFAP2P55001 183 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 EIF5AP63241 154 aaKnown RBP11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 CD69Q07108 199 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 ARL16Q0P5N6 197 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 CLINT1Q14677 625 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 VWC2Q2TAL6 325 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 NECAP1Q8NC96 275 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 DMRT1Q9Y5R6 373 aa11.4□□□□□ -0.59
NIPAL3-202ENST00000339255 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SLC35B1P78383 322 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 CFHR3Q02985 330 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 OPCMLQ14982 345 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SLC16A13Q7RTY0 426 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SLC51BQ86UW2 128 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SLA2Q9H6Q3 261 aa11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 NIPBLQ6KC79 2804 aaeCLIP11.39□□□□□ -0.59
NIPAL3-202ENST00000339255 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 NDUFA7O95182 113 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 IFNA5P01569 189 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 IGHG4P01861 327 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 TMEM95Q3KNT9 176 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 Q6ZSV7 163 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 UBAC2Q8NBM4 344 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 SLC35E1Q96K37 410 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 ZNF471Q9BX82 626 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 PARD6GQ9BYG4 376 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 ZNF355PQ9NSJ1 428 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 SERTAD4Q9NUC0 356 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 LINC00527Q9UJ94 153 aa11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-202ENST00000339255 SOX15O60248 233 aa11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 IGLV1-40P01703 118 aa11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 STOML3Q8TAV4 291 aa11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 BSCL2Q96G97 398 aaPredicted RBP11.37□□□□□ -0.59
NIPAL3-202ENST00000339255 I3L2K1 104 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 MPDU1O75352 247 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 MT-CO2P00403 227 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 PRH1P02810 166 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 RHOGP84095 191 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 AKR1C1Q04828 323 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 FNDC4Q9H6D8 234 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 WFDC1Q9HC57 220 aa11.36□□□□□ -0.59
NIPAL3-202ENST00000339255 NPVFQ9HCQ7 196 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms