RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 K7EIM0 57 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 HPGDSO60760 199 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 CMTM3Q96MX0 182 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 RNF2Q99496 336 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 RARRES2Q99969 163 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 MFFQ9GZY8 342 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 NAA50Q9GZZ1 169 aaKnown RBP11.5□□□□□ -0.57
LINC01116-202ENST00000339037 SMPXQ9UHP9 88 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
LINC01116-202ENST00000339037 RYR1P21817 5038 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 CTSGP08311 255 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 TSPAN5P62079 268 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
LINC01116-202ENST00000339037 ZNF124Q15973 351 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 SSBP4Q9BWG4 385 aaPredicted RBP11.49□□□□□ -0.57
LINC01116-202ENST00000339037 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 SCPEP1Q9HB40 452 aa11.49□□□□□ -0.57
LINC01116-202ENST00000339037 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 NUPL2O15504 423 aaKnown RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 SNAPC5O75971 98 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 YIF1AO95070 293 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 RCVRNP35243 200 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 TFPI2P48307 235 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 RBMS2Q15434 407 aaKnown RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 RNASE12Q5GAN4 147 aaKnown RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 TBC1D26Q86UD7 250 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 C11orf45Q8TAV5 145 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
LINC01116-202ENST00000339037 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 PRNDQ9UKY0 176 aa11.48□□□□□ -0.57
LINC01116-202ENST00000339037 PKHD1P08F94 4074 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 IGKV3-7A0A075B6H7 116 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 M0QYG6 137 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 CHEK1O14757 476 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 RGS13O14921 159 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 IFNA4P05014 189 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 SMIM18P0DKX4 95 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 CADM3Q8N126 398 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 OR11H2Q8NH07 326 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 OR10C1Q96KK4 312 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 FKBP11Q9NYL4 201 aa11.47□□□□□ -0.57
LINC01116-202ENST00000339037 RORCP51449 518 aa11.46□□□□□ -0.57
LINC01116-202ENST00000339037 CTF1Q16619 201 aa11.46□□□□□ -0.57
LINC01116-202ENST00000339037 LPCAT3Q6P1A2 487 aa11.46□□□□□ -0.57
LINC01116-202ENST00000339037 SEC22AQ96IW7 307 aa11.46□□□□□ -0.57
LINC01116-202ENST00000339037 TSC22D3Q99576 134 aa11.46□□□□□ -0.57
LINC01116-202ENST00000339037 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 FAM25AB3EWG3 89 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 FAM25CB3EWG5 89 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 FAM25GB3EWG6 89 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 GABARAPO95166 117 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 MFAP4P55083 255 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 UCP3P55916 312 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 GBGT1Q8N5D6 347 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 MRGPRFQ96AM1 343 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 MISP3Q96FF7 219 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 ZNF414Q96IQ9 312 aa11.45□□□□□ -0.58
LINC01116-202ENST00000339037 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
LINC01116-202ENST00000339037 I3L2K1 104 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
LINC01116-202ENST00000339037 S100GP29377 79 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 PAFAH1B2P68402 229 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 TXN2Q99757 166 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 NXF2Q9GZY0 626 aaKnown RBP11.44□□□□□ -0.58
LINC01116-202ENST00000339037 KLK11Q9UBX7 282 aa11.44□□□□□ -0.58
LINC01116-202ENST00000339037 FAT2Q9NYQ8 4349 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 DEFB4AO15263 64 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 CD5P06127 495 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 PI3P19957 117 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 TCTAP57738 103 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 IZUMO4Q1ZYL8 232 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 GPR107Q5VW38 600 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 MZT2AQ6P582 158 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 H2BFWTQ7Z2G1 175 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 LHFPL1Q86WI0 220 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 OR52I2Q8NH67 350 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 EXTL2Q9UBQ6 330 aa11.43□□□□□ -0.58
LINC01116-202ENST00000339037 GNG7O60262 68 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 MT-CO2P00403 227 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
LINC01116-202ENST00000339037 CD3DP04234 171 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms