RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FAM131CQ96AQ9 280 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 PYGO2Q9BRQ0 406 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 MCRIP2Q9BUT9 160 aaKnown RBP13.48□□□□□ -0.25
NPHP3-201ENST00000337331 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
NPHP3-201ENST00000337331 A0A0G2JMM0 328 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 A0A1W2PPB8 328 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 A0A1W2PS18 150 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 KIR3DP1A8MWS1 328 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 SLC25A17O43808 307 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 ZNRF1Q8ND25 227 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 ZNF581Q9P0T4 197 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 PGPA6NDG6 321 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 Q1RN00 199 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 LINC00470Q9BZP3 86 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 IGLL1P15814 213 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 ZNF441Q8N8Z8 693 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 TMEM116Q8NCL8 245 aa13.48□□□□□ -0.25
NPHP3-201ENST00000337331 PPBPP02775 128 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 CD40P25942 277 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
NPHP3-201ENST00000337331 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 C12orf77C9JDV5 145 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 F2RL2O00254 374 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 ZC2HC1AQ96GY0 325 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 GNB1LQ9BYB4 327 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 HIGD1AQ9Y241 93 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 FAM231BA6NCW3 169 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 CDX4O14627 284 aaPredicted RBP13.47□□□□□ -0.25
NPHP3-201ENST00000337331 MC5RP33032 325 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 OR10J3Q5JRS4 329 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 MRPL14Q6P1L8 145 aaKnown RBP13.47□□□□□ -0.25
NPHP3-201ENST00000337331 SGK494Q96LW2 274 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 LIME1Q9H400 295 aa13.47□□□□□ -0.25
NPHP3-201ENST00000337331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.46□□□□□ -0.25
NPHP3-201ENST00000337331 A1L4Q6 167 aa13.46□□□□□ -0.25
NPHP3-201ENST00000337331 RPL30P62888 115 aaKnown RBP13.46□□□□□ -0.25
NPHP3-201ENST00000337331 SNRNP40Q96DI7 357 aaKnown RBP13.46□□□□□ -0.25
NPHP3-201ENST00000337331 JPT1Q9UK76 154 aa13.46□□□□□ -0.25
NPHP3-201ENST00000337331 STAG3L3P0CL85 134 aa13.46□□□□□ -0.25
NPHP3-201ENST00000337331 FADS6Q8N9I5 356 aa13.46□□□□□ -0.25
NPHP3-201ENST00000337331 SCGB1C2P0DMR2 95 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 RAB9AP51151 201 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 HIST1H1AQ02539 215 aaPredicted RBP13.46□□□□□ -0.26
NPHP3-201ENST00000337331 C16orf54Q6UWD8 224 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 CD5LO43866 347 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 AZU1P20160 251 aa13.46□□□□□ -0.26
NPHP3-201ENST00000337331 USF3Q68DE3 2245 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 SLC25A53Q5H9E4 307 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 DEPPQ9NTK1 212 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 PPIAL4CA0A0B4J2A2 164 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 LOC389332A0A1B0GUA5 103 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 FAM181BA6NEQ2 426 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 NDUFB8O95169 186 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 PPIAL4GP0DN37 164 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF257Q9Y2Q1 563 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 IGHV2-26A0A0B4J1V2 119 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 SMIM13P0DJ93 91 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 GCHFRP30047 84 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 ECSCRQ19T08 205 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 PLPPR1Q8TBJ4 325 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 TSKUQ8WUA8 353 aa13.45□□□□□ -0.26
NPHP3-201ENST00000337331 A0A0G2JLM5 398 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 Q6ZT83 130 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 SCNM1Q9BWG6 230 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 CLUHP3Q96NS8 147 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 NABP2Q9BQ15 211 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 C1QTNF5Q9BXJ0 243 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 IDI2-AS1Q9NZ38 188 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 CCL21O00585 134 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 SLC35E4Q6ICL7 350 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
NPHP3-201ENST00000337331 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 ZNF716A6NP11 495 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 DLL1O00548 723 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 RRHO14718 337 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 CGAP01215 116 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 Q0VG73 95 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 FDCSPQ8NFU4 85 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 C5orf30Q96GV9 206 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 EAF1Q96JC9 268 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-201ENST00000337331 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 IGLC7A0M8Q6 106 aa13.43□□□□□ -0.26
NPHP3-201ENST00000337331 H3BTX0 84 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms