RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CACNA1AO00555 2505 aa7.15□□□□□ -1.27
SNCA-201ENST00000336904 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 STAG3L3P0CL85 134 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 APOBEC3AP31941 199 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 CDKN1AP38936 164 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 TCL1AP56279 114 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ADORA2A-AS1P86434 159 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 C3orf36Q3SXR2 165 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 LDLRAD2Q5SZI1 272 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 KDF1Q8NAX2 398 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 OR52E5Q8NH55 327 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 OCC1Q8TAD7 63 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 CORO2AQ92828 525 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ASCL2Q99929 193 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 METTL1Q9UBP6 276 aaKnown RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 A0A1W2PPI3 338 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 FCN1O00602 326 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 TMPRSS3P57727 454 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 PNRC1Q12796 327 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 OR5B12Q96R08 314 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 VKORC1Q9BQB6 163 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 MIOXQ9UGB7 285 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 POLQO75417 2590 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 MYO18BQ8IUG5 2567 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ACACBO00763 2458 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 SEC14L6B5MCN3 397 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 K7EN84 100 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 OR5G3P0C626 314 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ORM2P19652 201 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ZNF672Q499Z4 452 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 AARDQ4LEZ3 155 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 PYY3Q5JQD4 70 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.14□□□□□ -1.27
SNCA-201ENST00000336904 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 ADTRPQ96IZ2 230 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 FBXL15Q9H469 300 aa7.14□□□□□ -1.27
SNCA-201ENST00000336904 F6UZH7 168 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 CXorf1O96002 111 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 IGLV2-23P01705 113 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
SNCA-201ENST00000336904 UQCRFS1P47985 274 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 RND2P52198 227 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
SNCA-201ENST00000336904 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 BLNKQ8WV28 456 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 MALSU1Q96EH3 234 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 NGBQ9NPG2 151 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 IGHV2-26A0A0B4J1V2 119 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 A0A1W2PPR1 153 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 ZNF320A2RRD8 509 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 PPP5D1E7EU14 171 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 MFAP2P55001 183 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 CASP6P55212 293 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 DLX6P56179 175 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 RHOBP62745 196 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 KLF17Q5JT82 389 aaPredicted RBP7.13□□□□□ -1.27
SNCA-201ENST00000336904 OR5AN1Q8NGI8 311 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 OR4C13Q8NGP0 309 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 SGMS2Q8NHU3 365 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 GGACTQ9BVM4 153 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 RNASE7Q9H1E1 156 aaKnown RBP7.13□□□□□ -1.27
SNCA-201ENST00000336904 NDUFA4L2Q9NRX3 87 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 MSRB2Q9Y3D2 182 aa7.13□□□□□ -1.27
SNCA-201ENST00000336904 PPIAL4CA0A0B4J2A2 164 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 GRIFINA4D1Z8 144 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 FAM90A9PA6NNJ1 464 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 VSTM5A8MXK1 200 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 C22orf46C9J442 243 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PPP1R2P9O14990 202 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PPIAL4GP0DN37 164 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 CD33P20138 364 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 HOXA5P20719 270 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PPOXP50336 477 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PRR20EP86478 221 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PRR20CP86479 221 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PRR20DP86480 221 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PRR20BP86481 221 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PRR20AP86496 221 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PLGLAQ15195 96 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 C9orf152Q5JTZ5 239 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 TMEM133Q9H2Q1 129 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 RAB9BQ9NP90 201 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 SLC45A2Q9UMX9 530 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 WASHC3Q9Y3C0 194 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 B4DEV8 164 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 GGTLC3B5MD39 225 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 TNFRSF13BO14836 293 aaPredicted RBP7.12□□□□□ -1.27
SNCA-201ENST00000336904 MGST1P10620 155 aaKnown RBP7.12□□□□□ -1.27
SNCA-201ENST00000336904 IL3RAP26951 378 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 CA7P43166 264 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 GNG5P63218 68 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 MEF2CQ06413 473 aaPredicted RBP7.12□□□□□ -1.27
SNCA-201ENST00000336904 RAB31Q13636 194 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 PQLC2Q6ZP29 291 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
SNCA-201ENST00000336904 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms