RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 K7EM74 188 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 NUPR1O60356 82 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 SRP14P37108 136 aaKnown RBP5.39□□□□□ -1.55
HMG20A-201ENST00000336216 CDKN1AP38936 164 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 RND2P52198 227 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 RPL30P62888 115 aaKnown RBP5.39□□□□□ -1.55
HMG20A-201ENST00000336216 SAXO1Q8IYX7 474 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 OR8B3Q8NGG8 313 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 OR1L8Q8NGR8 309 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 NPIPB3Q92617 1050 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 NEUROG1Q92886 237 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 OR8B2Q96RD0 313 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 NPVFQ9HCQ7 196 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 TMEM106BQ9NUM4 274 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 PKD1L2Q7Z442 2459 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 A0A1W2PNU3 283 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-201ENST00000336216 CHEK1O14757 476 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 GNG7O60262 68 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 IGKV1-5P01602 117 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 LINC00869P0C866 280 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 ATP6V1FQ16864 119 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 RPEL1Q2QD12 228 aa5.39□□□□□ -1.55
HMG20A-201ENST00000336216 PSMG3Q9BT73 122 aaPredicted RBP5.39□□□□□ -1.55
HMG20A-201ENST00000336216 FN1P02751 2386 aaKnown RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 CEP192Q8TEP8 1941 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 IGHV1-69-2A0A0G2JMI3 117 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 HSBP1L1C9JCN9 74 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 MLNRO43193 412 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 MOSP00540 346 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 SRIP30626 198 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 GPR6P46095 362 aaPredicted RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 RPL8P62917 257 aaKnown RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 ASPHD1Q5U4P2 390 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PNKDQ8N490 385 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 ZBTB34Q8NCN2 500 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 MBD3L1Q8WWY6 194 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 ADTRPQ96IZ2 230 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 NPCDR1Q9BY65 106 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 TBL2Q9Y4P3 447 aaKnown RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PPIAL4CA0A0B4J2A2 164 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 HELTA6NFD8 242 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PPIAL4GP0DN37 164 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 CSN1S1P47710 185 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF137PP52743 207 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 C10orf55Q5SWW7 151 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 C1orf194Q5T5A4 169 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 SFXN3Q9BWM7 321 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PLSCR2Q9NRY7 297 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PRNDQ9UKY0 176 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 MRPS18CQ9Y3D5 142 aaKnown RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 FOXI3A8MTJ6 420 aaPredicted RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 IQCF6A8MYZ5 107 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PDE6DO43924 150 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 IGHV3-23P01764 117 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 TDGF1P13385 188 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 HTN1P15515 57 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 CRYBB3P26998 211 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 BRS3P32247 399 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 HSPE1P61604 102 aaKnown RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 SLC35E4Q6ICL7 350 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF474Q6S9Z5 364 aaPredicted RBP5.38□□□□□ -1.55
HMG20A-201ENST00000336216 PQLC2Q6ZP29 291 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 KLHDC1Q8N7A1 406 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 VSTM2AQ8TAG5 236 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 TMEM242Q9NWH2 141 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 BET1LQ9NYM9 111 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 RNF115Q9Y4L5 304 aa5.38□□□□□ -1.55
HMG20A-201ENST00000336216 K7EQM0 130 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 M0R2Z0 102 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 CA2P00918 260 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 UNQ5815/PRO19632Q6UWF5 114 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 FAM90A1Q86YD7 464 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 MMD2Q8IY49 270 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 MIEN1Q9BRT3 115 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 FBXL15Q9H469 300 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 IDI2-AS1Q9NZ38 188 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 SS18L1O75177 396 aaPredicted RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 CA1P00915 261 aaPredicted RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 USF1P22415 310 aaPredicted RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 LMO1P25800 156 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 RPL27AP46776 148 aaKnown RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 LCN12Q6JVE5 192 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 LINC01551Q86U37 167 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 HAPLN4Q86UW8 402 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 TCTEX1D1Q8N7M0 179 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 OR2D3Q8NGH3 330 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 FAM57AQ8TBR7 257 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 WASHC3Q9Y3C0 194 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 FLNBO75369 2602 aaKnown RBP5.37□□□□□ -1.55
HMG20A-201ENST00000336216 TRAV3A0A0B4J244 114 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 MFAP2P55001 183 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 TMPRSS3P57727 454 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 PAFAH1B2P68402 229 aa5.37□□□□□ -1.55
HMG20A-201ENST00000336216 NRN1LQ496H8 165 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms