RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MS4A5Q9H3V2 200 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 F8WEM9 126 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ITGB1BP1O14713 200 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 MLNRO43193 412 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SFTA2Q6UW10 78 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 CACNG8Q8WXS5 425 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TRBV5-7A0A0A0MS05 114 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 C9orf172C9J069 976 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 NTN1O95631 604 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TRBV5-3A0A0A0MS03 114 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SCTP09683 121 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ZP1P60852 638 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 KLHDC2Q9Y2U9 406 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ATXN7O15265 892 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 NPPCP23582 126 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 KLF17Q5JT82 389 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 CBLN3Q6UW01 205 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SLC25A38Q96DW6 304 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 EAF1Q96JC9 268 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 OR2H2O95918 312 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 MOSP00540 346 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SAA1P0DJI8 122 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TDGF1P13385 188 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 PRTN3P24158 256 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 ADAMTSL5Q6ZMM2 481 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 APOBEC4Q8WW27 367 aaKnown RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 LAMTOR3Q9UHA4 124 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 C2orf16Q68DN1 1984 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SCO2A0A1W2PP80 73 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 KLF4O43474 513 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TFPI2P48307 235 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 UNQ5815/PRO19632Q6UWF5 114 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 SLC25A48Q6ZT89 311 aaKnown RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 FAM57AQ8TBR7 257 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 NDUFC2O95298 119 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 IL6RP08887 468 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-201ENST00000335551 PATE4P0C8F1 98 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 TMEM74BQ9NUR3 256 aa5.27□□□□□ -1.57
CSMD1-201ENST00000335551 MPV17P39210 176 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 KIR3DS1Q14943 382 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 RSPO2Q6UXX9 243 aaPredicted RBP5.26□□□□□ -1.57
CSMD1-201ENST00000335551 SPINT1O43278 529 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 NDUFA2O43678 99 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 NGFRP08138 427 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 PPDPFLQ8WWR9 84 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 YBX2Q9Y2T7 364 aaKnown RBP5.26□□□□□ -1.57
CSMD1-201ENST00000335551 BDP1A6H8Y1 2624 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 NEUROG3Q9Y4Z2 214 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 LEPROTO15243 131 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 LHX2P50458 406 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.26□□□□□ -1.57
CSMD1-201ENST00000335551 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 A0A1B0GW64 132 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 DTX1Q86Y01 620 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 ATP6V0BQ99437 205 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 CXCL16Q9H2A7 254 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 OTORQ9NRC9 128 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 CALYQ9NYX4 217 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 AMBPP02760 352 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 NBEAP1P0C6P0 100 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 FAM89BQ8N5H3 189 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 JPT1Q9UK76 154 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 OR9G9P0C7N8 305 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 SELLP14151 372 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 CHAC1Q9BUX1 264 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 ALPK3Q96L96 1907 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 LOC105371242A0A075B767 164 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 PPIAL4CA0A0B4J2A2 164 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 A0A1W2PPE3 182 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 ZG16O60844 167 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 PPIAL4GP0DN37 164 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 GZMBP10144 247 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 TMEM240Q5SV17 173 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 ABHD17AQ96GS6 310 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 OSTCQ9NRP0 149 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 IGHV3OR16-12A0A075B7B8 117 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 C9JCJ5 164 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
CSMD1-201ENST00000335551 LIFP15018 202 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 Q9H3A6 140 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 JPT2Q9H910 190 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 R4GN57 208 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 GFRA3O60609 400 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 PSG1P11464 419 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 TSPAN7P41732 249 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 GUSBP11Q6P575 273 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 PLA2G3Q9NZ20 509 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 F2Z2F3 143 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 H3BMM0 161 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 CCL20P78556 96 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 ZNF462Q96JM2 2506 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 THY1P04216 161 aa5.25□□□□□ -1.57
CSMD1-201ENST00000335551 RNASE4P34096 147 aaKnown RBP5.25□□□□□ -1.57
CSMD1-201ENST00000335551 BCL6BQ8N143 479 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms