RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OR8G2PQ6IF36 304 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 C10orf99Q6UWK7 81 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 ETV3LQ6ZN32 361 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 ACOT7LQ6ZUV0 252 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 INO80EQ8NBZ0 244 aaPredicted RBP16.81■□□□□ 0.28
TPM1-204ENST00000334895 SLC25A31Q9H0C2 315 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 C16orf95Q9H693 158 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 KLK9Q9UKQ9 250 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 HSPB11Q9Y547 144 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 NDUFA7O95182 113 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 IFNA4P05014 189 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 AP2S1P53680 142 aaPredicted RBP16.81■□□□□ 0.28
TPM1-204ENST00000334895 RAB11AP62491 216 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 LGALSLQ3ZCW2 172 aaPredicted RBP16.81■□□□□ 0.28
TPM1-204ENST00000334895 ZNF329Q86UD4 541 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 TMEM217Q8N7C4 229 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 IGLV1-40P01703 118 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 HNRNPCP07910 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
TPM1-204ENST00000334895 DEFA5Q01523 94 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 SLC25A24Q6NUK1 477 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 STX12Q86Y82 276 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 C9orf62Q8N4C0 152 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 LINC01006Q8NI28 216 aa16.8■□□□□ 0.28
TPM1-204ENST00000334895 BAXQ07812 192 aa16.79■□□□□ 0.28
TPM1-204ENST00000334895 ZNF345Q14585 488 aa16.79■□□□□ 0.28
TPM1-204ENST00000334895 PPP1R14BQ96C90 147 aa16.79■□□□□ 0.28
TPM1-204ENST00000334895 MISP3Q96FF7 219 aa16.79■□□□□ 0.28
TPM1-204ENST00000334895 FNDC4Q9H6D8 234 aaPredicted RBP16.79■□□□□ 0.28
TPM1-204ENST00000334895 TRBV9A0A0B4J1U6 114 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 NUP62P37198 522 aaPredicted RBP16.78■□□□□ 0.28
TPM1-204ENST00000334895 MLANAQ16655 118 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 OR1L6Q8NGR2 347 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 RNASEH2CQ8TDP1 164 aaKnown RBP16.78■□□□□ 0.28
TPM1-204ENST00000334895 MS4A10Q96PG2 267 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 ZC4H2Q9NQZ6 224 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 FBN1P35555 2871 aaKnown RBP16.78■□□□□ 0.28
TPM1-204ENST00000334895 OR2J3O76001 311 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 IGHG4P01861 327 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 OR2F1Q13607 317 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 KCNRGQ8N5I3 272 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 OR5C1Q8NGR4 320 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 PINX1Q96BK5 328 aaKnown RBP16.78■□□□□ 0.28
TPM1-204ENST00000334895 GON7Q9BXV9 100 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 KLK15Q9H2R5 256 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 FBXL17Q9UF56 701 aa16.78■□□□□ 0.28
TPM1-204ENST00000334895 PSMB11A5LHX3 300 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 I3L2K1 104 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 K7EIM0 57 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 NDUFB8O95169 186 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 BRI3O95415 125 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 CD69Q07108 199 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 SLC38A11Q08AI6 406 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 KRTAP24-1Q3LI83 254 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 LCNL1Q6ZST4 164 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 OR10P1Q8NGE3 313 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 WIPF2Q8TF74 440 aaPredicted RBP16.77■□□□□ 0.27
TPM1-204ENST00000334895 SMIM3Q9BZL3 60 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 WFDC1Q9HC57 220 aa16.77■□□□□ 0.27
TPM1-204ENST00000334895 IGHV3-21A0A0B4J1V1 117 aa16.76■□□□□ 0.27
TPM1-204ENST00000334895 H3BUA1 57 aa16.76■□□□□ 0.27
TPM1-204ENST00000334895 MT-CO2P00403 227 aa16.76■□□□□ 0.27
TPM1-204ENST00000334895 IGHV3-48P01763 117 aa16.76■□□□□ 0.27
TPM1-204ENST00000334895 RHOGP84095 191 aa16.76■□□□□ 0.27
TPM1-204ENST00000334895 MRPL36Q9P0J6 103 aaKnown RBP16.76■□□□□ 0.27
TPM1-204ENST00000334895 CORTO00230 105 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 HIST1H1BP16401 226 aaKnown RBP16.75■□□□□ 0.27
TPM1-204ENST00000334895 PSMB8P28062 276 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 OPRK1P41145 380 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 CLINT1Q14677 625 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 TMUB2Q71RG4 321 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.75■□□□□ 0.27
TPM1-204ENST00000334895 FBXL7Q9UJT9 491 aa16.75■□□□□ 0.27
TPM1-204ENST00000334895 PF4V1P10720 104 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 S100A11P31949 105 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 HBG1P69891 147 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 HBG2P69892 147 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 SLC35B1P78383 322 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 EXOSC2Q13868 293 aaKnown RBP16.74■□□□□ 0.27
TPM1-204ENST00000334895 SLC16A13Q7RTY0 426 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 CENPVQ7Z7K6 275 aaPredicted RBP16.74■□□□□ 0.27
TPM1-204ENST00000334895 OR1S2Q8NGQ3 325 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 OR4F5Q8NH21 305 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 BOLA1Q9Y3E2 137 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 A0A0D9SG52 128 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 MFSD2BA6NFX1 497 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 TRGV3P03979 118 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 MDKP21741 143 aaPredicted RBP16.74■□□□□ 0.27
TPM1-204ENST00000334895 GPX4P36969 197 aaPredicted RBP16.74■□□□□ 0.27
TPM1-204ENST00000334895 DLK1P80370 383 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 KLHDC1Q8N7A1 406 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 NECAP1Q8NC96 275 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 ARL6Q9H0F7 186 aa16.74■□□□□ 0.27
TPM1-204ENST00000334895 CYB5BO43169 146 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 SCAF4O95104 1147 aaKnown RBP16.73■□□□□ 0.27
TPM1-204ENST00000334895 RAB9AP51151 201 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 VWC2Q2TAL6 325 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 KRTAP21-3Q3LHN1 58 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 TEX38Q6PEX7 206 aa16.73■□□□□ 0.27
TPM1-204ENST00000334895 LILRB2Q8N423 598 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms