RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 K7EQM0 130 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 ETFRF1Q6IPR1 90 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 ZNF705AQ6ZN79 300 aaPredicted RBP13.17□□□□□ -0.3
SYNM-201ENST00000328642 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 ZNF292O60281 2723 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 NBL1P41271 181 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 DNAJC4Q9NNZ3 241 aa13.17□□□□□ -0.3
SYNM-201ENST00000328642 TSTD3H0UI37 97 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 HYPMO75409 117 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 FABP1P07148 127 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 PYYP10082 97 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 SRSF4Q08170 494 aaKnown RBP13.16□□□□□ -0.3
SYNM-201ENST00000328642 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 NDUFA2O43678 99 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 GCHFRP30047 84 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 DHRS7BQ6IAN0 325 aaPredicted RBP13.16□□□□□ -0.3
SYNM-201ENST00000328642 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 CLN5O75503 358 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 UTF1Q5T230 341 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 PRNTQ86SH4 94 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 ELOVL1Q9BW60 279 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 ZNF430Q9H8G1 570 aaPredicted RBP13.16□□□□□ -0.3
SYNM-201ENST00000328642 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
SYNM-201ENST00000328642 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
SYNM-201ENST00000328642 OR2J3O76001 311 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 BRS3P32247 399 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 LGALS7P47929 136 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 CD81P60033 236 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 DEFA6Q01524 100 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 IGFL3Q6UXB1 125 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
SYNM-201ENST00000328642 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 TIMM23O14925 209 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 ZNF506Q5JVG8 444 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 TREML4Q6UXN2 200 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 EIF4E3Q8N5X7 224 aaKnown RBP13.15□□□□□ -0.3
SYNM-201ENST00000328642 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
SYNM-201ENST00000328642 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 NCKAP5O14513 1909 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 C15orf61A6NNL5 157 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 UPK2O00526 184 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 LY86O95711 162 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 IGLV1-44P01699 117 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 TMEM133Q9H2Q1 129 aa13.15□□□□□ -0.3
SYNM-201ENST00000328642 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
SYNM-201ENST00000328642 MEOX2P50222 304 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 SLC25A33Q9BSK2 321 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 ACANP16112 2415 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 MFAP2P55001 183 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 LINC00305Q7Z4B0 112 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 P2RX4Q99571 388 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 CD5P06127 495 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 Q8WTZ3 238 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 BTF3L4Q96K17 158 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 IFT22Q9H7X7 185 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 DPM3Q9P2X0 92 aa13.14□□□□□ -0.31
SYNM-201ENST00000328642 TEX50A0A1B0GTY4 177 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 FOXH1O75593 365 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 COL8A1P27658 744 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 OSR1Q8TAX0 266 aaPredicted RBP13.13□□□□□ -0.31
SYNM-201ENST00000328642 THYN1Q9P016 225 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
SYNM-201ENST00000328642 PDE6DO43924 150 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 MPDU1O75352 247 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 HSBP1O75506 76 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 CNTFRP26992 372 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 ASPHD1Q5U4P2 390 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 IL4P05112 153 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 IL15RAQ13261 267 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 HEPN1Q6WQI6 88 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 ZNF253O75346 499 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 TRGC1P0CF51 173 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 TFPI2P48307 235 aa13.13□□□□□ -0.31
SYNM-201ENST00000328642 RELBQ01201 579 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 RNASEKQ6P5S7 137 aaKnown RBP13.12□□□□□ -0.31
SYNM-201ENST00000328642 MAPK1IP1LQ8NDC0 245 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 OR1L6Q8NGR2 347 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 ASCL2Q99929 193 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 UQCRFS1P47985 274 aa13.12□□□□□ -0.31
SYNM-201ENST00000328642 TCTAP57738 103 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms