RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
ABCF1-201ENST00000326195 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
ABCF1-201ENST00000326195 GP6Q9HCN6 339 aa8.54□□□□□ -1.04
ABCF1-201ENST00000326195 CLN8Q9UBY8 286 aa8.54□□□□□ -1.04
ABCF1-201ENST00000326195 MALRD1Q5VYJ5 2156 aa8.54□□□□□ -1.04
ABCF1-201ENST00000326195 C11orf94C9JXX5 98 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SPINK4O60575 86 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 C3orf79P0CE67 100 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 COX5AP20674 150 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.049e-12■■□□□ 14.2
ABCF1-201ENST00000326195 NEIL1Q96FI4 390 aaPredicted RBP8.53□□□□□ -1.04
ABCF1-201ENST00000326195 BET1LQ9NYM9 111 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 GNG12Q9UBI6 72 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SAP30O75446 220 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 LINC00596Q86U02 117 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SFRP2Q96HF1 295 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 ABHD14BQ96IU4 210 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SMPD2O60906 423 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 OR2H2O95918 312 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 IER3P46695 156 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 SELENOVP59797 346 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 RELBQ01201 579 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 Q6ZSR3 168 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 CCL17Q92583 94 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 OR2D2Q9H210 308 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 DSCAMO60469 2012 aa8.53□□□□□ -1.04
ABCF1-201ENST00000326195 TRAV30A0A087WSZ9 112 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IGKV1-6A0A0C4DH72 117 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 OR2T8A6NH00 312 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 VENTXO95231 258 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 AMTP48728 403 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 SLC24A4Q8NFF2 622 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 NGBQ9NPG2 151 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 A0A1W2PS18 150 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 TMEM30CPA0ZSE6 113 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 FCN1O00602 326 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 PLA2G2AP14555 144 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 CEBPDP49716 269 aaPredicted RBP8.52□□□□□ -1.05
ABCF1-201ENST00000326195 SLC38A11Q08AI6 406 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 ZNF718Q3SXZ3 478 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 GCSAMLQ5JQS6 135 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 ST6GALNAC6Q969X2 333 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 HINT2Q9BX68 163 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IGHV3-43A0A0B4J1X8 118 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IGHV3-43DP0DP04 118 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 NIT1Q86X76 327 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 OR10P1Q8NGE3 313 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 ZNF596Q8TC21 504 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 IL19Q9UHD0 177 aa8.52□□□□□ -1.05
ABCF1-201ENST00000326195 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 IGHV2-26A0A0B4J1V2 119 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 TRAV24A0A0B4J272 114 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 DEFB108AA8MXU0 73 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 COLCA1Q6ZS62 124 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 OR1L1Q8NH94 360 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 PINX1Q96BK5 328 aaKnown RBP8.51□□□□□ -1.05
ABCF1-201ENST00000326195 PKIBQ9C010 78 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 ZNF586Q9NXT0 402 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 VPS13CQ709C8 3753 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 ARFGEF3Q5TH69 2177 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 A0A1W2PPR1 153 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 HAND1O96004 215 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 ZNF90Q03938 601 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 TFF3Q07654 80 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 AESQ08117 197 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 SPINK9Q5DT21 86 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 SLC35D1Q9NTN3 355 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 APCP25054 2843 aa8.51□□□□□ -1.05
ABCF1-201ENST00000326195 IGHV3OR15-7A0A075B7D8 119 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 E7EQL1 145 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 SPINT2O43291 252 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 ZNF253O75346 499 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 EDDM3BP56851 147 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 SLC35B1P78383 322 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 RHOGP84095 191 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 TPRX1Q8N7U7 411 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 MEGF9Q9H1U4 602 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
ABCF1-201ENST00000326195 FBN2P35556 2912 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 A0A1W2PPV4 95 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 SNURFLB1AK76 121 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 HSBP1L1C9JCN9 74 aa8.5□□□□□ -1.05
ABCF1-201ENST00000326195 IGKV3-15P01624 115 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms