RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 RND1Q92730 232 aa13.08□□□□□ -0.32
USHBP1-202ENST00000324554 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
USHBP1-202ENST00000324554 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
USHBP1-202ENST00000324554 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 C9JCJ5 164 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 C16orf97H3BN30 126 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 EREGO14944 169 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 SAA1P0DJI8 122 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-202ENST00000324554 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 SELENOTP62341 195 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 ZNF833PQ6ZTB9 187 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 ZCCHC24Q8N2G6 241 aaKnown RBP13.07□□□□□ -0.32
USHBP1-202ENST00000324554 SLC25A10Q9UBX3 287 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-202ENST00000324554 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 C17orf100A8MU93 164 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-202ENST00000324554 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 LBHQ53QV2 105 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-202ENST00000324554 BET1LQ9NYM9 111 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 NAGKQ9UJ70 344 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 SLC45A2Q9UMX9 530 aa13.07□□□□□ -0.32
USHBP1-202ENST00000324554 DPRXA6NFQ7 191 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 MT-CO2P00403 227 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 LGALS4P56470 323 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 PSG5Q15238 335 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 CMTM2Q8TAZ6 248 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 UHRF2Q96PU4 802 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 NABP2Q9BQ15 211 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 MRPL18Q9H0U6 180 aaKnown RBP13.06□□□□□ -0.32
USHBP1-202ENST00000324554 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
USHBP1-202ENST00000324554 FCN3O75636 299 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 RBPJQ06330 500 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 MLANAQ16655 118 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 MRPL20Q9BYC9 149 aaKnown RBP13.05□□□□□ -0.32
USHBP1-202ENST00000324554 V9GYV3 84 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 AREGP15514 252 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 CCL3L1P16619 93 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 CRYBB3P26998 211 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 MMD2Q8IY49 270 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 OR5B3Q8NH48 314 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 LY96Q9Y6Y9 160 aa13.05□□□□□ -0.32
USHBP1-202ENST00000324554 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 F2Z2F3 143 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 THBDP07204 575 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 ERVFC1-1P60608 527 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
USHBP1-202ENST00000324554 BSPH1Q075Z2 132 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 CENPWQ5EE01 88 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 C1orf194Q5T5A4 169 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 Q6ZWC4 215 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 TGIF2LXQ8IUE1 241 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 CBLN4Q9NTU7 201 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 SERF1AO75920 110 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 IER3P46695 156 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 KLRB1Q12918 225 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 OSR1Q8TAX0 266 aaPredicted RBP13.04□□□□□ -0.32
USHBP1-202ENST00000324554 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
USHBP1-202ENST00000324554 LRBAP50851 2863 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 H0YJW9 148 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 RNASE2P10153 161 aaKnown RBP13.03□□□□□ -0.32
USHBP1-202ENST00000324554 CRISP2P16562 243 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 ATP5IP56385 69 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-202ENST00000324554 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 OR8I2Q8N0Y5 310 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 HARBI1Q96MB7 349 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 HELTA6NFD8 242 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 FCN1O00602 326 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 OR10J1P30954 320 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 GNG4P50150 75 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 TMEM200BQ69YZ2 307 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 PQLC2Q6ZP29 291 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 OR9G1Q8NH87 305 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 SAP30LQ9HAJ7 183 aa13.03□□□□□ -0.32
USHBP1-202ENST00000324554 FAM90A27PA6NNH2 459 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 GGTLC3B5MD39 225 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 APOA2P02652 100 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 OR10J4P0C629 311 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 GRNP28799 593 aaKnown RBP13.02□□□□□ -0.32
USHBP1-202ENST00000324554 REG1BP48304 166 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 CDSNQ15517 529 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 ST6GALNAC3Q8NDV1 305 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 OR5AN1Q8NGI8 311 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 SLC35E1Q96K37 410 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 TBX15Q96SF7 602 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 RNASE7Q9H1E1 156 aaKnown RBP13.02□□□□□ -0.32
USHBP1-202ENST00000324554 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 ARL2-SNX15V9GYD0 113 aa13.02□□□□□ -0.32
USHBP1-202ENST00000324554 SNURFLB1AK76 121 aa13.02□□□□□ -0.33
USHBP1-202ENST00000324554 CCL21O00585 134 aa13.02□□□□□ -0.33
USHBP1-202ENST00000324554 OR7C2O60412 319 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms