RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CD5P06127 495 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 PVRIGQ6DKI7 326 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 A0A1B0GW64 132 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 CEACAM4O75871 244 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MYO9BQ13459 2157 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 PAX1P15863 534 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 M0R381 172 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 FOXC2Q99958 501 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 ATP5LO75964 103 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 SUPT4H1P63272 117 aaKnown RBP9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 OR10J3Q5JRS4 329 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 FAM19A2Q8N3H0 131 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 ST6GALNAC6Q969X2 333 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 EPDR1Q9UM22 224 aa9.08□□□□□ -0.96
SNRNP200-201ENST00000323853 PPP1R17O96001 155 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 GEMIN7Q9H840 131 aaKnown RBP9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 C9JCJ5 164 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 EFNB3Q15768 340 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 HAX1O00165 279 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 HEPN1Q6WQI6 88 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 OSTCQ9NRP0 149 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 SDK1Q7Z5N4 2213 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 C1QL4Q86Z23 238 aa9.07□□□□□ -0.96
SNRNP200-201ENST00000323853 NINQ8N4C6 2090 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 IGHV1-46P01743 117 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 LEPP41159 167 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 QRFPP83859 136 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 REG4Q9BYZ8 158 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 OR11H12B2RN74 326 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 H7C1H1 209 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 PYYP10082 97 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 ORMDL3Q8N138 153 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 OR11H2Q8NH07 326 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 PRB3Q04118 309 aaPredicted RBP9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 Q0VFX4 171 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 FAM168AQ92567 244 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 NRN1Q9NPD7 142 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 KLHDC3Q9BQ90 382 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 GNB1LQ9BYB4 327 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 MYOFQ9NZM1 2061 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 FAM166AQ6J272 317 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
SNRNP200-201ENST00000323853 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 DMRTA2Q96SC8 542 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 TSC2P49815 1807 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 COLCA1Q6ZS62 124 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 PRSS2P07478 247 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 OCC1Q8TAD7 63 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 RLFQ13129 1914 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 SNAI2O43623 268 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 CCDC88CQ9P219 2028 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 CD59P13987 128 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 ZNF600Q6ZNG1 722 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 WDR83OSQ9Y284 106 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 SBF1O95248 1867 aa9.05□□□□□ -0.96
SNRNP200-201ENST00000323853 NDUFA3O95167 84 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 FOXG1P55316 489 aaPredicted RBP9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 DUX3Q96PT4 197 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 IGHV3OR16-8A0A075B7F1 116 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 CDKN1AP38936 164 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 FOXF2Q12947 444 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 SLC50A1Q9BRV3 221 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 THBDP07204 575 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 C8orf46Q8TAG6 207 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 PLSCR4Q9NRQ2 329 aa9.04□□□□□ -0.96
SNRNP200-201ENST00000323853 C5orf63A6NC05 138 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms