RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 AMBPP02760 352 aa18.09■□□□□ 0.49
PNKP-201ENST00000322344 MLANAQ16655 118 aa18.09■□□□□ 0.49
PNKP-201ENST00000322344 ZNF503Q96F45 646 aa18.09■□□□□ 0.49
PNKP-201ENST00000322344 IL36BQ9NZH7 164 aa18.09■□□□□ 0.49
PNKP-201ENST00000322344 ICE1Q9Y2F5 2266 aa18.09■□□□□ 0.49
PNKP-201ENST00000322344 OR7C2O60412 319 aa18.08■□□□□ 0.49
PNKP-201ENST00000322344 GATA2P23769 480 aaPredicted RBP18.08■□□□□ 0.49
PNKP-201ENST00000322344 LGALS7P47929 136 aa18.08■□□□□ 0.49
PNKP-201ENST00000322344 CNN1P51911 297 aaKnown RBP18.08■□□□□ 0.49
PNKP-201ENST00000322344 DIAPH2-AS1Q14236 149 aa18.08■□□□□ 0.49
PNKP-201ENST00000322344 TNFRSF14Q92956 283 aa18.08■□□□□ 0.49
PNKP-201ENST00000322344 SLC25A33Q9BSK2 321 aa18.08■□□□□ 0.49
PNKP-201ENST00000322344 A0A1W2PRE2 83 aa18.08■□□□□ 0.48
PNKP-201ENST00000322344 K7EN84 100 aa18.08■□□□□ 0.48
PNKP-201ENST00000322344 OR5R1Q8NH85 324 aa18.08■□□□□ 0.48
PNKP-201ENST00000322344 TMEM133Q9H2Q1 129 aa18.08■□□□□ 0.48
PNKP-201ENST00000322344 ZNF430Q9H8G1 570 aaPredicted RBP18.08■□□□□ 0.48
PNKP-201ENST00000322344 HELTA6NFD8 242 aa18.07■□□□□ 0.48
PNKP-201ENST00000322344 CGB1A6NKQ9 187 aa18.07■□□□□ 0.48
PNKP-201ENST00000322344 HNF1AP20823 631 aa18.07■□□□□ 0.48
PNKP-201ENST00000322344 WT1-ASQ06250 92 aa18.07■□□□□ 0.48
PNKP-201ENST00000322344 CDPF1Q6NVV7 123 aa18.07■□□□□ 0.48
PNKP-201ENST00000322344 MRPL41Q8IXM3 137 aaKnown RBP18.07■□□□□ 0.48
PNKP-201ENST00000322344 E7EUB6 86 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 YPEL3P61236 119 aaPredicted RBP18.06■□□□□ 0.48
PNKP-201ENST00000322344 OR1L4Q8NGR5 311 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 OR2T6Q8NHC8 308 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 PRDM13Q9H4Q3 707 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 PSMB11A5LHX3 300 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 GNG4P50150 75 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 JOSD1Q15040 202 aaPredicted RBP18.06■□□□□ 0.48
PNKP-201ENST00000322344 DNAJC4Q9NNZ3 241 aa18.06■□□□□ 0.48
PNKP-201ENST00000322344 CRYBB3P26998 211 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 ZNF90Q03938 601 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 TRAV20A0A0B4J274 112 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.05■□□□□ 0.48
PNKP-201ENST00000322344 FSTL3O95633 263 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 PPOXP50336 477 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 SELENOTP62341 195 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 C11orf42Q8N5U0 333 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 TEX45Q8NA69 505 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 THAP8Q8NA92 274 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 TMEM18Q96B42 140 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 SCNM1Q9BWG6 230 aa18.05■□□□□ 0.48
PNKP-201ENST00000322344 SLC25A17O43808 307 aa18.04■□□□□ 0.48
PNKP-201ENST00000322344 OR10J4P0C629 311 aa18.04■□□□□ 0.48
PNKP-201ENST00000322344 CASP6P55212 293 aa18.04■□□□□ 0.48
PNKP-201ENST00000322344 CENPWQ5EE01 88 aa18.04■□□□□ 0.48
PNKP-201ENST00000322344 ZGRF1Q86YA3 2104 aa18.04■□□□□ 0.48
PNKP-201ENST00000322344 RALYQ9UKM9 306 aaKnown RBP18.04■□□□□ 0.48
PNKP-201ENST00000322344 TCRBV4S1A1TA0A5B7 111 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 PRRX1P54821 245 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 BPIFB3P59826 476 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 C10orf55Q5SWW7 151 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 FNDC4Q9H6D8 234 aaPredicted RBP18.03■□□□□ 0.48
PNKP-201ENST00000322344 GGTLC3B5MD39 225 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 COX7A2P2O60397 106 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 COL8A2P25067 703 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 RPEL1Q2QD12 228 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 TIGITQ495A1 244 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 ETFRF1Q6IPR1 90 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 FAM167A-AS1Q96KT0 104 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 SLC25A2Q9BXI2 301 aa18.03■□□□□ 0.48
PNKP-201ENST00000322344 AKAP13Q12802 2813 aa18.02■□□□□ 0.48
PNKP-201ENST00000322344 GCGP01275 180 aa18.02■□□□□ 0.48
PNKP-201ENST00000322344 ERVFC1-1P60608 527 aa18.02■□□□□ 0.48
PNKP-201ENST00000322344 MMD2Q8IY49 270 aa18.02■□□□□ 0.48
PNKP-201ENST00000322344 NPIPB3Q92617 1050 aa18.02■□□□□ 0.48
PNKP-201ENST00000322344 A0A1W2PPI3 338 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 FBXL19-AS1Q494R0 122 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 BOD1L1Q8NFC6 3051 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 RIF1Q5UIP0 2472 aaKnown RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 ENSAO43768 121 aaKnown RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 FAM87AP0C7U9 286 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 LGALS4P56470 323 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 PKIAP61925 76 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 SUMO1P63165 101 aaKnown RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 UBE2L3P68036 154 aaKnown RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 RPL19P84098 196 aaKnown RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 C10orf113Q5VZT2 155 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 PVRIGQ6DKI7 326 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 OSTCQ9NRP0 149 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 V9GYV3 84 aa18.01■□□□□ 0.47
PNKP-201ENST00000322344 ZFHX2Q9C0A1 2572 aaPredicted RBP18.01■□□□□ 0.47
PNKP-201ENST00000322344 IGHV2-26A0A0B4J1V2 119 aa18■□□□□ 0.47
PNKP-201ENST00000322344 SLC17A3O00476 420 aa18■□□□□ 0.47
PNKP-201ENST00000322344 RBP4P02753 201 aa18■□□□□ 0.47
PNKP-201ENST00000322344 MRGPRG-AS1Q2M3A8 158 aa18■□□□□ 0.47
PNKP-201ENST00000322344 GBGT1Q8N5D6 347 aa18■□□□□ 0.47
PNKP-201ENST00000322344 OR5AU1Q8NGC0 362 aa18■□□□□ 0.47
PNKP-201ENST00000322344 TNCP24821 2201 aa18■□□□□ 0.47
PNKP-201ENST00000322344 RP1L1Q8IWN7 2480 aaPredicted RBP18■□□□□ 0.47
PNKP-201ENST00000322344 IGKV1D-37A0A075B6S9 117 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 IGLV1-47P01700 117 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 PRSS8Q16651 343 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 TPSG1Q9NRR2 321 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 NBEAQ8NFP9 2946 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 RD3LP0DJH9 198 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 GZMBP10144 247 aa17.99■□□□□ 0.47
PNKP-201ENST00000322344 SSBP2P81877 361 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms