RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CORTO00230 105 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 SNAI2O43623 268 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 MMP23AO75900 390 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 IGHV3-48P01763 117 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 FABP6P51161 128 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 TNFRSF19Q9NS68 423 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 RPH3ALQ9UNE2 315 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 ABCA1O95477 2261 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 TNRC6BQ9UPQ9 1833 aaKnown RBP7.93□□□□□ -1.14
PTPRA-202ENST00000318266 MUC21A0A0G2JKD1 596 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 MUC21A0A140T8X8 626 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 OR4C46A6NHA9 309 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF134P52741 427 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF766Q5HY98 468 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 MUC21Q5SSG8 566 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 AMMECR1LQ6DCA0 310 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 LHFPL4Q7Z7J7 247 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 HES4Q9HCC6 221 aa7.93□□□□□ -1.14
PTPRA-202ENST00000318266 IGKV1OR2-108A0A075B7D4 117 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 IZUMO1RA6ND01 250 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 ISLRO14498 428 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 C1orf229Q6ZS94 237 aaPredicted RBP7.92□□□□□ -1.14
PTPRA-202ENST00000318266 MUC15Q8N387 334 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 OR9G1Q8NH87 305 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 CST9LQ9H4G1 147 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 LY96Q9Y6Y9 160 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 SMIM27A0A1W2PRY6 76 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 AGFG2O95081 481 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 PLAUP00749 431 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 LINC00869P0C866 280 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 ACP7Q6ZNF0 438 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 DEFB127Q9H1M4 99 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 TMEM167BQ9NRX6 74 aa7.92□□□□□ -1.14
PTPRA-202ENST00000318266 MAP1BP46821 2468 aaKnown RBP7.92□□□□□ -1.14
PTPRA-202ENST00000318266 RP1L1Q8IWN7 2480 aaPredicted RBP7.92□□□□□ -1.14
PTPRA-202ENST00000318266 HEATR1Q9H583 2144 aaKnown RBP7.92□□□□□ -1.14
PTPRA-202ENST00000318266 IGHV3OR15-7A0A075B7D8 119 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 C2orf70A6NJV1 201 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PATE3B3GLJ2 98 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PYYP10082 97 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TCTAP57738 103 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 UBE2L3P68036 154 aaKnown RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 ARG2P78540 354 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 MORN2Q502X0 79 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TMEM251Q8N6I4 163 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 NUP35Q8NFH5 326 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 KLF14Q8TD94 323 aaPredicted RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 BCL2L2Q92843 193 aaPredicted RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TTTY12Q9BZ98 90 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 B4GALT7Q9UBV7 327 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 HIGD1CA8MV81 97 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 H0YJW9 148 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 SP1P08047 785 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TMPRSS3P57727 454 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRR20EP86478 221 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRR20CP86479 221 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRR20DP86480 221 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRR20BP86481 221 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRR20AP86496 221 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 C11orf53Q8IXP5 236 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 OR8B3Q8NGG8 313 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 OR5B3Q8NH48 314 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 NANOS1Q8WY41 292 aaKnown RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 SNRNP40Q96DI7 357 aaKnown RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TRIB1Q96RU8 372 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 MED13Q9UHV7 2174 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 EP300Q09472 2414 aaPredicted RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PRB4P10163 310 aaPredicted RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 PPOXP50336 477 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF137PP52743 207 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 ZNF138P52744 262 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 MRPL49Q13405 166 aaKnown RBP7.91□□□□□ -1.14
PTPRA-202ENST00000318266 WDR82Q6UXN9 313 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TCF24Q7RTU0 167 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 CD177Q8N6Q3 437 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 ZNRF1Q8ND25 227 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 FAM173AQ9BQD7 235 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TMEM70Q9BUB7 260 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 SAP30LQ9HAJ7 183 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
PTPRA-202ENST00000318266 TRAV30A0A087WSZ9 112 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 A0A087X0K7 114 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 TAX1BP3O14907 124 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 TIMM8AO60220 97 aaPredicted RBP7.9□□□□□ -1.14
PTPRA-202ENST00000318266 GNG5P63218 68 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 SSPNQ14714 243 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 AARDQ4LEZ3 155 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 ABHD17BQ5VST6 288 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 WDR31Q8NA23 367 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 C15orf65H3BRN8 121 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 CYC1P08574 325 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 RIPPLY3P57055 190 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 TBR1Q16650 682 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 SSX8Q7RTT4 187 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 LRRC29Q8WV35 223 aa7.9□□□□□ -1.14
PTPRA-202ENST00000318266 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms