RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CRISP2P16562 243 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF585BQ52M93 769 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 LRRC10Q5BKY1 277 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 FAM216BQ8N7L0 139 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CCL13Q99616 98 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF430Q9H8G1 570 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-201ENST00000317677 PATZ1Q9HBE1 687 aaKnown RBP10.72□□□□□ -0.69
CPNE1-201ENST00000317677 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
CPNE1-201ENST00000317677 CD3EP07766 207 aa10.71□□□□□ -0.69
CPNE1-201ENST00000317677 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
CPNE1-201ENST00000317677 ZNF695Q8IW36 515 aa10.71□□□□□ -0.69
CPNE1-201ENST00000317677 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
CPNE1-201ENST00000317677 CLN8Q9UBY8 286 aa10.71□□□□□ -0.69
CPNE1-201ENST00000317677 DEFB108AA8MXU0 73 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 ADAM20O43506 726 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 VDAC1P21796 283 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 RPL30P62888 115 aaKnown RBP10.7□□□□□ -0.7
CPNE1-201ENST00000317677 LTC4SQ16873 150 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 LHX4Q969G2 390 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 RAB40CQ96S21 281 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 OR2D2Q9H210 308 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 SLC39A9Q9NUM3 307 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 ANKHD1Q8IWZ3 2542 aaKnown RBP10.7□□□□□ -0.7
CPNE1-201ENST00000317677 COL12A1Q99715 3063 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 J3QR06 171 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 RAMP3O60896 148 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF253O75346 499 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 SLC25A6P12236 298 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 EDDM3BP56851 147 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 LOXL3P58215 753 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 BRWD1-AS2P59051 145 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 EFNB3Q15768 340 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 VAMP3Q15836 100 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 C17orf58Q2M2W7 97 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 PRR27Q6MZM9 219 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 MUC15Q8N387 334 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF645Q8N7E2 425 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-201ENST00000317677 SAMD10Q9BYL1 202 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 TIMM9Q9Y5J7 89 aa10.7□□□□□ -0.7
CPNE1-201ENST00000317677 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
CPNE1-201ENST00000317677 HRNRQ86YZ3 2850 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-201ENST00000317677 USF3Q68DE3 2245 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 TNFRSF1AP19438 455 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-201ENST00000317677 PRRX1P54821 245 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 LINC00205P59089 165 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 HTD2P86397 168 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 IZUMO4Q1ZYL8 232 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 TRAT1Q6PIZ9 186 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 PET117Q6UWS5 81 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF808Q8N4W9 903 aaPredicted RBP10.69□□□□□ -0.7
CPNE1-201ENST00000317677 PPP1R35Q8TAP8 253 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 SAP30LQ9HAJ7 183 aa10.69□□□□□ -0.7
CPNE1-201ENST00000317677 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 F2RL2O00254 374 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
CPNE1-201ENST00000317677 PROP1O75360 226 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 TOX4O94842 621 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 IGKV1-5P01602 117 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 Q6ZRM9 215 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF525Q8N782 197 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 UHRF2Q96PU4 802 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 GRIFINA4D1Z8 144 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 SPINT2O43291 252 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 FAM71F2Q6NXP2 309 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 PRSS57Q6UWY2 283 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 Q6ZVH6 145 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 NIT1Q86X76 327 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 BAGE3Q86Y29 109 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 BAGE2Q86Y30 109 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 OR4S2Q8NH73 311 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 TMEM204Q9BSN7 226 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 CALYQ9NYX4 217 aa10.68□□□□□ -0.7
CPNE1-201ENST00000317677 TRBV9A0A0B4J1U6 114 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 A1L4Q6 167 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 KIAA1324LA8MWY0 1029 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-201ENST00000317677 CORTO00230 105 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 IGHV3-7P01780 117 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF16P17020 682 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-201ENST00000317677 ZNF134P52741 427 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 KRTDAPP60985 99 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 C1orf229Q6ZS94 237 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-201ENST00000317677 OR4F17Q8NGA8 305 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 SGMS2Q8NHU3 365 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 OR4F4Q96R69 305 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 DYNLRB1Q9NP97 96 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 NRN1Q9NPD7 142 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 JPT1Q9UK76 154 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 PSG11Q9UQ72 335 aa10.67□□□□□ -0.7
CPNE1-201ENST00000317677 LINC00473A8K010 186 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 B9A039 149 aa10.66□□□□□ -0.7
CPNE1-201ENST00000317677 NXPH3O95157 252 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms