RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PPP5CP53041 499 aa13.25□□□□□ -0.29
TPM1-203ENST00000317516 MEF2DQ14814 521 aa13.25□□□□□ -0.29
TPM1-203ENST00000317516 DUSP18Q8NEJ0 188 aa13.25□□□□□ -0.29
TPM1-203ENST00000317516 ENY2Q9NPA8 101 aa13.25□□□□□ -0.29
TPM1-203ENST00000317516 IGHV3OR16-8A0A075B7F1 116 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 TRAV14DV4A0A0A6YYC5 116 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 A0A0B4J293 547 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 LCE6AA0A183 80 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 CTDSP2O14595 271 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 ZNF207O43670 478 aaKnown RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 BMI1P35226 326 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 APOC4P55056 127 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 IZUMO4Q1ZYL8 232 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 OR4D10Q8NGI6 311 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 OR13C8Q8NGS7 320 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 RNASE11Q8TAA1 199 aaKnown RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 MIXL1Q9H2W2 232 aa13.24□□□□□ -0.29
TPM1-203ENST00000317516 C14orf166Q9Y224 244 aaKnown RBP13.24□□□□□ -0.29
TPM1-203ENST00000317516 IGHV7-4-1A0A0J9YVY3 117 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 DISC1C4P0D8 188 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 CORTO00230 105 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 ST8SIA3O43173 380 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 UCP1P25874 307 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 SP6Q3SY56 376 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 CLVS1Q8IUQ0 354 aaPredicted RBP13.23□□□□□ -0.29
TPM1-203ENST00000317516 MARCH1Q8TCQ1 289 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 OR10C1Q96KK4 312 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 RHPN1-AS1Q9BWJ2 59 aa13.23□□□□□ -0.29
TPM1-203ENST00000317516 TEX13DA0A0J9YY54 714 aaPredicted RBP13.22□□□□□ -0.29
TPM1-203ENST00000317516 UBE2CO00762 179 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 CHEK1O14757 476 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 IGHV3-48P01763 117 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 CD5P06127 495 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 P0C879 139 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 SPCS2Q15005 226 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 SURF2Q15527 256 aaPredicted RBP13.22□□□□□ -0.29
TPM1-203ENST00000317516 SPINK9Q5DT21 86 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 DIRAS2Q96HU8 199 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
TPM1-203ENST00000317516 UBQLN2Q9UHD9 624 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 TENM2Q9NT68 2774 aa13.22□□□□□ -0.29
TPM1-203ENST00000317516 CTDSPLO15194 276 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 ETV6P41212 452 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
TPM1-203ENST00000317516 TMBIM6P55061 237 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 PAFAH1B2P68402 229 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 IL18Q14116 193 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 Q6ZWC4 215 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 SMIM4Q8WVI0 70 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 RNF2Q99496 336 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 OVOL2Q9BRP0 275 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.29
TPM1-203ENST00000317516 KIR2DL5BA0A0G2JN68 375 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 KIR2DL5BA0A0G2JPC4 375 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 CDS2O95674 445 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 AKAIN1P0CW23 69 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 DHODHQ02127 395 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 KIR2DL5AQ8N109 375 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
TPM1-203ENST00000317516 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.2□□□□□ -0.3
TPM1-203ENST00000317516 CCDC59Q9P031 241 aaKnown RBP13.2□□□□□ -0.3
TPM1-203ENST00000317516 NOL3O60936 208 aaKnown RBP13.19□□□□□ -0.3
TPM1-203ENST00000317516 JTBO76095 146 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 SPCS3P61009 180 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
TPM1-203ENST00000317516 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 PRRT1Q99946 306 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
TPM1-203ENST00000317516 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 CACFD1Q9UGQ2 172 aa13.19□□□□□ -0.3
TPM1-203ENST00000317516 RSL24D1Q9UHA3 163 aaKnown RBP13.19□□□□□ -0.3
TPM1-203ENST00000317516 IGHV3-49A0A0A0MS15 119 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 SPRY2O43597 315 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 TMEM50AO95807 157 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 RNASE2P10153 161 aaKnown RBP13.18□□□□□ -0.3
TPM1-203ENST00000317516 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
TPM1-203ENST00000317516 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 DYNC2LI1Q8TCX1 351 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 GLYATL2Q8WU03 294 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms