RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NRGNQ92686 78 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
VRK3-201ENST00000316763 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 FBN2P35556 2912 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 A0A1W2PPQ1 181 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PHOX2AO14813 284 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
VRK3-201ENST00000316763 IGHV2-70P01814 119 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 CCL3L1P16619 93 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PRR20EP86478 221 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PRR20CP86479 221 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PRR20DP86480 221 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PRR20BP86481 221 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PRR20AP86496 221 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 C8orf31Q8N9H6 132 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 OR10X1Q8NGY0 326 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 FLYWCH2Q96CP2 140 aaKnown RBP11.48□□□□□ -0.57
VRK3-201ENST00000316763 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 H0YJW9 148 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
VRK3-201ENST00000316763 TMEM177Q53S58 311 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 LINC00311Q8N616 119 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 OR5AN1Q8NGI8 311 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 PCGF1Q9BSM1 259 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 ZNRD1Q9P1U0 126 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 CTSZQ9UBR2 303 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 HECTD1Q9ULT8 2610 aa11.48□□□□□ -0.57
VRK3-201ENST00000316763 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 LY6HO94772 140 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 USF1P22415 310 aaPredicted RBP11.47□□□□□ -0.57
VRK3-201ENST00000316763 CHRNA7P36544 502 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 CTAG1AP78358 180 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 LCN2P80188 198 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 PDPNQ86YL7 162 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 OR4C13Q8NGP0 309 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 IGFBPL1Q8WX77 278 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 ELOVL1Q9BW60 279 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
VRK3-201ENST00000316763 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 TACC2O95359 2948 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 SPG11Q96JI7 2443 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 A0A1W2PN81 502 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 OVOL3O00110 214 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 TYMSP04818 313 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 LINC00869P0C866 280 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
VRK3-201ENST00000316763 OR4P4Q8NGL7 312 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 GPR61Q9BZJ8 451 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
VRK3-201ENST00000316763 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.58
VRK3-201ENST00000316763 CDKN1AP38936 164 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 FAM78BQ5VT40 261 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 ZNF596Q8TC21 504 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 CACNG8Q8WXS5 425 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 CCL19Q99731 98 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 NABP2Q9BQ15 211 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 DERL1Q9BUN8 251 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.58
VRK3-201ENST00000316763 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.58
VRK3-201ENST00000316763 YTHDF2Q9Y5A9 579 aaKnown RBP11.46□□□□□ -0.58
VRK3-201ENST00000316763 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 DVL1O14640 695 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 AREGP15514 252 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
VRK3-201ENST00000316763 TAS2R45P59539 299 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 GAMTQ14353 236 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 GFI1BQ5VTD9 330 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 PNKDQ8N490 385 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 TNCP24821 2201 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 IL3RAP26951 378 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 OR10J1P30954 320 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
VRK3-201ENST00000316763 CD69Q07108 199 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 FOXL1Q12952 345 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 CLEC12BQ2HXU8 276 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 PDZD11Q5EBL8 140 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 TMEM183AQ8IXX5 376 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
VRK3-201ENST00000316763 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms