RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LCN2P80188 198 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 SPNS3Q6ZMD2 512 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 VMO1Q7Z5L0 202 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 HIST1H2BAQ96A08 127 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 SLC35E1Q96K37 410 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 RNF5Q99942 180 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 DOPEY1Q5JWR5 2465 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 TMEM250H0YL14 139 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 FCN1O00602 326 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 CXorf1O96002 111 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 IGHV3-48P01763 117 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 AREGP15514 252 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 MAS1LP35410 378 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 CEACAM3P40198 252 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 UBE2G2P60604 165 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 CFHR4Q92496 578 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 BPESC1Q9GZL8 116 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 SDF2L1Q9HCN8 221 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 ZFYVE26Q68DK2 2539 aa14.7□□□□□ -0.06
CCDC43-201ENST00000315286 C11orf94C9JXX5 98 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 OR2C1O95371 312 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 ZNF674Q2M3X9 581 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 FAM24BQ8N5W8 94 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 KIR3DL3Q8N743 410 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 RPUSD4Q96CM3 377 aaKnown RBP14.69□□□□□ -0.06
CCDC43-201ENST00000315286 A0A087WWC5 75 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 SSBP2P81877 361 aaPredicted RBP14.69□□□□□ -0.06
CCDC43-201ENST00000315286 PAX2Q02962 417 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 C19orf35Q6ZS72 473 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 SMIM7Q9BQ49 75 aa14.69□□□□□ -0.06
CCDC43-201ENST00000315286 FOXH1O75593 365 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 RNF224P0DH78 156 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 CD24P25063 80 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 MFAP2P55001 183 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 LMO4P61968 165 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 PNRC1Q12796 327 aaPredicted RBP14.68□□□□□ -0.06
CCDC43-201ENST00000315286 FAM78BQ5VT40 261 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 CST9LP1Q5W188 147 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 MRPL36Q9P0J6 103 aaKnown RBP14.68□□□□□ -0.06
CCDC43-201ENST00000315286 MLXQ9UH92 298 aa14.68□□□□□ -0.06
CCDC43-201ENST00000315286 NDUFS6O75380 124 aaKnown RBP14.67□□□□□ -0.06
CCDC43-201ENST00000315286 MT-ND4LP03901 98 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 NPPCP23582 126 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 ATP5G3P48201 142 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 HABP2Q14520 560 aaPredicted RBP14.67□□□□□ -0.06
CCDC43-201ENST00000315286 SSX2Q16385 188 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 MIR17HGQ75NE6 70 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 MRPL41Q8IXM3 137 aaKnown RBP14.67□□□□□ -0.06
CCDC43-201ENST00000315286 NPIPB3Q92617 1050 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 PARLQ9H300 379 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 TEX22C9J3V5 150 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 IGHV4-39P01824 125 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 HOXB4P17483 251 aaPredicted RBP14.67□□□□□ -0.06
CCDC43-201ENST00000315286 GCHFRP30047 84 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 PLGLAQ15195 96 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 MMDQ15546 238 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 PVRIGQ6DKI7 326 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 ZNF114Q8NC26 417 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 SIRPDQ9H106 197 aa14.67□□□□□ -0.06
CCDC43-201ENST00000315286 MYO18BQ8IUG5 2567 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 ABCA1O95477 2261 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 B4DEV8 164 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 KIAA0141Q14154 515 aaPredicted RBP14.66□□□□□ -0.06
CCDC43-201ENST00000315286 FBLN7Q53RD9 439 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 CYP2G1PQ6ZSU1 146 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 DYNAPQ8N1N2 210 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 OR51G1Q8NGK1 321 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 MISP3Q96FF7 219 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 YPEL4Q96NS1 127 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 NAT8Q9UHE5 227 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 FUT9Q9Y231 359 aa14.66□□□□□ -0.06
CCDC43-201ENST00000315286 IGHV2-70DA0A0C4DH43 119 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 PRB1P04280 392 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 TMEM241Q24JQ0 296 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 RUSC1-AS1Q66K80 236 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 NANPQ8TBE9 248 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 SRSF12Q8WXF0 261 aaKnown RBP14.65□□□□□ -0.06
CCDC43-201ENST00000315286 IGKV1D-37A0A075B6S9 117 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 MOSP00540 346 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 TMEM37Q8WXS4 190 aa14.65□□□□□ -0.06
CCDC43-201ENST00000315286 EAF1Q96JC9 268 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-201ENST00000315286 NBR2O15453 112 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 FOLR2P14207 255 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 RND2P52198 227 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 FLI1Q01543 452 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-201ENST00000315286 OR1P1Q8NH06 330 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 SLC25A33Q9BSK2 321 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 SVEP1Q4LDE5 3571 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 PDE6DO43924 150 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 CRYGCP07315 174 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 LGALS4P56470 323 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 ZNF90Q03938 601 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 HES1Q14469 280 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 RNF212Q495C1 297 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 THAP8Q8NA92 274 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 NPBQ8NG41 125 aa14.64□□□□□ -0.07
CCDC43-201ENST00000315286 BBC3Q96PG8 261 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-201ENST00000315286 YTHDF2Q9Y5A9 579 aaKnown RBP14.64□□□□□ -0.07
CCDC43-201ENST00000315286 PSMB11A5LHX3 300 aa14.63□□□□□ -0.07
CCDC43-201ENST00000315286 TOX4O94842 621 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms