RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 C11orf42Q8N5U0 333 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 ADTRPQ96IZ2 230 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 MGST2Q99735 147 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 PYGO2Q9BRQ0 406 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 TMEM204Q9BSN7 226 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 TPSG1Q9NRR2 321 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 IGHV1-8P0DP01 117 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 AARDQ4LEZ3 155 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 FAM78BQ5VT40 261 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 SSX8Q7RTT4 187 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 ACY3Q96HD9 319 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 WDR83OSQ9Y284 106 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 CENPEQ02224 2701 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 TEX50A0A1B0GTY4 177 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 PAGE4O60829 102 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 TMEM155Q4W5P6 130 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 C1orf159Q96HA4 380 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 PLEKHA3Q9HB20 300 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 FOXA2Q9Y261 457 aaPredicted RBP10.07□□□□□ -0.8
RNF4-201ENST00000314289 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 UPK2O00526 184 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 NDUFS7O75251 213 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 APOA2P02652 100 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 GATA2P23769 480 aaPredicted RBP10.07□□□□□ -0.8
RNF4-201ENST00000314289 DLX6P56179 175 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 FBXL19-AS1Q494R0 122 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 PDLIM3Q53GG5 364 aaPredicted RBP10.07□□□□□ -0.8
RNF4-201ENST00000314289 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
RNF4-201ENST00000314289 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 OR52E5Q8NH55 327 aa10.07□□□□□ -0.8
RNF4-201ENST00000314289 FLYWCH2Q96CP2 140 aaKnown RBP10.07□□□□□ -0.8
RNF4-201ENST00000314289 FAM90A9PA6NNJ1 464 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 ZNF705FA8MVS1 300 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 ZNF705DP0CH99 300 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 ZNF705BP0CI00 300 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 CD33P20138 364 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 RAB4BP61018 213 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 PARD6GQ9BYG4 376 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 TIMM9Q9Y5J7 89 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 A0A0U1RQK1 487 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 SLC25A17O43808 307 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 REG1AP05451 166 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 CNN1P51911 297 aaKnown RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 CENPVQ7Z7K6 275 aaPredicted RBP10.06□□□□□ -0.8
RNF4-201ENST00000314289 TMEM256Q8N2U0 113 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 NABP2Q9BQ15 211 aa10.06□□□□□ -0.8
RNF4-201ENST00000314289 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 ZNF320A2RRD8 509 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 C17orf112F2Z3M2 114 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 CNTFRP26992 372 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 CDKN1AP38936 164 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
RNF4-201ENST00000314289 ACOT6Q3I5F7 207 aaPredicted RBP10.05□□□□□ -0.8
RNF4-201ENST00000314289 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 KAAG1Q9UBP8 84 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 PXMP4Q9Y6I8 212 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 USP9XQ93008 2570 aaPredicted RBP10.05□□□□□ -0.8
RNF4-201ENST00000314289 IGFBP2P18065 325 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 ZNF705AQ6ZN79 300 aaPredicted RBP10.05□□□□□ -0.8
RNF4-201ENST00000314289 OR5AN1Q8NGI8 311 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 COMMD5Q9GZQ3 224 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 PGPEP1LA6NFU8 196 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 TMEM250H0YL14 139 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 M0R143 59 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 ACTL6BO94805 426 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 IL3RAP26951 378 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 OR9G1Q8NH87 305 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 PRNDQ9UKY0 176 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 POLR3KQ9Y2Y1 108 aaPredicted RBP10.05□□□□□ -0.8
RNF4-201ENST00000314289 TRAPPC1Q9Y5R8 145 aa10.05□□□□□ -0.8
RNF4-201ENST00000314289 CELSR2Q9HCU4 2923 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 A0A1W2PPV4 95 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 A6NNC1 897 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 PPIAL4GP0DN37 164 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 HNF1AP20823 631 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 PDLIM4P50479 330 aa10.04□□□□□ -0.8
RNF4-201ENST00000314289 LGALS4P56470 323 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms