RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 HCP5Q6MZN7 132 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 TRAT1Q6PIZ9 186 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 WDR82Q6UXN9 313 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 RNF2Q99496 336 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
NPAS4-201ENST00000311034 SORL1Q92673 2214 aa11.18□□□□□ -0.62
NPAS4-201ENST00000311034 NOTCH2Q04721 2471 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 CECR9P0C854 216 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 TMEM178AQ8NBL3 297 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 ITLN1Q8WWA0 313 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 RAB1CQ92928 201 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 A0A1W2PNU3 283 aaPredicted RBP11.17□□□□□ -0.62
NPAS4-201ENST00000311034 DPRXA6NFQ7 191 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 YPEL1O60688 119 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 PROP1O75360 226 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 HSBP1O75506 76 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 C3orf79P0CE67 100 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF137PP52743 207 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 SELENOTP62341 195 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
NPAS4-201ENST00000311034 STUMQ69YW2 141 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 YPEL2Q96QA6 119 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
NPAS4-201ENST00000311034 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
NPAS4-201ENST00000311034 V9GYV3 84 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MYO9AB2RTY4 2548 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 A0A1W2PS18 150 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 CSN3P07498 182 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 CD177Q8N6Q3 437 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 OR10W1Q8NGF6 305 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
NPAS4-201ENST00000311034 MRPS18CQ9Y3D5 142 aaKnown RBP11.17□□□□□ -0.62
NPAS4-201ENST00000311034 APCSP02743 223 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 C10orf55Q5SWW7 151 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF439Q8NDP4 499 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 NABP2Q9BQ15 211 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 UQCR10Q9UDW1 63 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF134P52741 427 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 FAM27E3Q08E93 113 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 C1orf174Q8IYL3 243 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 LAMTOR2Q9Y2Q5 125 aa11.16□□□□□ -0.62
NPAS4-201ENST00000311034 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 HYPMO75409 117 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 MFAP2P55001 183 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 MRPS11P82912 194 aaKnown RBP11.15□□□□□ -0.62
NPAS4-201ENST00000311034 RELBQ01201 579 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 IL19Q9UHD0 177 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
NPAS4-201ENST00000311034 SELENOVP59797 346 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 EIF4EBP1Q13541 118 aaPredicted RBP11.15□□□□□ -0.62
NPAS4-201ENST00000311034 RNF24Q9Y225 148 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 ZNF324O75467 553 aaPredicted RBP11.15□□□□□ -0.62
NPAS4-201ENST00000311034 VDAC2P45880 294 aaPredicted RBP11.15□□□□□ -0.62
NPAS4-201ENST00000311034 MORN2Q502X0 79 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
NPAS4-201ENST00000311034 TET2Q6N021 2002 aaPredicted RBP11.14□□□□□ -0.63
NPAS4-201ENST00000311034 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 M0R2Z0 102 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 GABRA6Q16445 453 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 OR4A47Q6IF82 309 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 TXNDC17Q9BRA2 123 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 CDC42EP3Q9UKI2 254 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 AKAP13Q12802 2813 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 ADH4P08319 380 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 RELQ04864 619 aaPredicted RBP11.14□□□□□ -0.63
NPAS4-201ENST00000311034 PLGLAQ15195 96 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 FAM168AQ92567 244 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 SLC45A2Q9UMX9 530 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 ZFYVE26Q68DK2 2539 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 BMPR1BO00238 502 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 TNRC18O15417 2968 aaPredicted RBP11.14□□□□□ -0.63
NPAS4-201ENST00000311034 FOXA3P55318 350 aaPredicted RBP11.14□□□□□ -0.63
NPAS4-201ENST00000311034 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
NPAS4-201ENST00000311034 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 TMEM136Q6ZRR5 245 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 OR4S2Q8NH73 311 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 OR9G1Q8NH87 305 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 PROCRQ9UNN8 238 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
NPAS4-201ENST00000311034 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
NPAS4-201ENST00000311034 LINC00614P0C842 121 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms