RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 MAP1LC3B2A6NCE7 125 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 TCF21O43680 179 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 CHST1O43916 411 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 MMP23AO75900 390 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 PSMB3P49720 205 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 PAFAH1B2P68402 229 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 PAX5Q02548 391 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 MSMO1Q15800 293 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 TMEM200BQ69YZ2 307 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 C16orf82Q7Z2V1 217 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 OR2T10Q8NGZ9 312 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 MAP1LC3BQ9GZQ8 125 aa8□□□□□ -1.13
CHRNA9-201ENST00000310169 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 SLC33A1O00400 549 aaPredicted RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 TMEM50AO95807 157 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 F2RP25116 425 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 CNN1P51911 297 aaKnown RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 CXorf66Q5JRM2 361 aaPredicted RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 Q6P435 159 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 MOB1BQ7L9L4 216 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 VMO1Q7Z5L0 202 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 TPRX1Q8N7U7 411 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 WDR61Q9GZS3 305 aaKnown RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 ATRQ13535 2644 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 hADV38S2A0JD32 116 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 OR3A1P47881 315 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 RPL23P62829 140 aaKnown RBP7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 AESQ08117 197 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 FOXL1Q12952 345 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 PDZD11Q5EBL8 140 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF66Q6ZN08 573 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 KIR3DL3Q8N743 410 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 OR5T1Q8NG75 326 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 MRGPRDQ8TDS7 321 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 LHX4Q969G2 390 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 SIRPDQ9H106 197 aa7.99□□□□□ -1.13
CHRNA9-201ENST00000310169 M0R1W7 72 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 SYNGR2O43760 224 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 IGHV4-38-2P0DP08 117 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 CEBPGP53567 150 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 MEF2CQ06413 473 aaPredicted RBP7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 KLF17Q5JT82 389 aaPredicted RBP7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF880Q6PDB4 577 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 FAM216AQ8WUB2 273 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 TBX15Q96SF7 602 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 TRGV10A0A0A0MS01 117 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 TRAV24A0A0B4J272 114 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 A0A1B0GV50 99 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 ZFP92A6NM28 416 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 CEBPZOSA8MTT3 80 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 PDE6DO43924 150 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 CST7O76096 145 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 CCL3L1P16619 93 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 SELENOTP62341 195 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 RUNX1Q01196 453 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF726P1Q15940 193 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 BRD3OSQ6XYD6 125 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 TMEM144Q7Z5S9 345 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF418Q8TF45 676 aaPredicted RBP7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF714Q96N38 554 aa7.98□□□□□ -1.13
CHRNA9-201ENST00000310169 CENPVL3A0A0U1RRI6 287 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 RNF212BA8MTL3 300 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 F6UZH7 168 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 PGLYRP1O75594 196 aaPredicted RBP7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 OMGP23515 440 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 YPEL3P61236 119 aaPredicted RBP7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 PRB3Q04118 309 aaPredicted RBP7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 COX19Q49B96 90 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF818PQ6ZRF7 136 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 GAPTQ8N292 157 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 TCTEX1D1Q8N7M0 179 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 Q8N7P7 452 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 SLC39A9Q9NUM3 307 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 LIN7CQ9NUP9 197 aaKnown RBP7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 NAGKQ9UJ70 344 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 LINC00312Q9Y6C7 94 aa7.97□□□□□ -1.13
CHRNA9-201ENST00000310169 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 FSHBP01225 129 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 PPBPP02775 128 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 PRTN3P24158 256 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 DLX1P56177 255 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 RPL15P61313 204 aaKnown RBP7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 HERPUD1Q15011 391 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 ADIRFQ15847 76 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 TEX43Q6ZNM6 134 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 ZBTB34Q8NCN2 500 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 TAF15Q92804 592 aaKnown RBP eCLIP7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 ZNF581Q9P0T4 197 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 OR2W1Q9Y3N9 320 aa7.96□□□□□ -1.13
CHRNA9-201ENST00000310169 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 IGHV1-69DA0A0B4J2H0 117 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 A0A1W2PRD5 423 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 A0A1W2PRF3 423 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 A0A1W2PRM7 423 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 ODAMA1E959 279 aa7.96□□□□□ -1.14
CHRNA9-201ENST00000310169 J3KRW8 73 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms