RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 MDP1Q86V88 176 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 MDS2Q8NDY4 140 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 PRSS33Q8NF86 280 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF71Q9NQZ8 489 aaPredicted RBP13.39□□□□□ -0.27
CCDC8-201ENST00000307522 MFAP2P55001 183 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 HCFC1P51610 2035 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 CSMD1Q96PZ7 3565 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 SMPD2O60906 423 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 CYC1P08574 325 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 CTXN2P0C2S0 81 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 FAM216AQ8WUB2 273 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF355PQ9NSJ1 428 aa13.38□□□□□ -0.27
CCDC8-201ENST00000307522 RHOGP84095 191 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 MGST2Q99735 147 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 KMT2EQ8IZD2 1858 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 GCHFRP30047 84 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 CX3CL1P78423 397 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 HELTA6NFD8 242 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 HSBP1L1C9JCN9 74 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 OR7C2O60412 319 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 TOX4O94842 621 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 HINT2Q9BX68 163 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 GTSF1LQ9H1H1 148 aa13.37□□□□□ -0.27
CCDC8-201ENST00000307522 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.37□□□□□ -0.27
CCDC8-201ENST00000307522 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
CCDC8-201ENST00000307522 H0YJW9 148 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 ARR3P36575 388 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 PSG5Q15238 335 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 VWC2Q2TAL6 325 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 SPACA3Q8IXA5 215 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 TMEM45BQ96B21 275 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 GAGE10A6NGK3 116 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 MIR17HGQ75NE6 70 aa13.36□□□□□ -0.27
CCDC8-201ENST00000307522 GRPP07492 148 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 BRWD1-AS2P59051 145 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 OR10J3Q5JRS4 329 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 TREML4Q6UXN2 200 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 OR52E5Q8NH55 327 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 TAAR6Q96RI8 345 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 HEYLQ9NQ87 328 aaPredicted RBP13.35□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
CCDC8-201ENST00000307522 PIP4P1Q86T03 277 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 FER1L6-AS1Q8NA97 138 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 C7orf71A4D174 169 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 AMY1AP04745 511 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 FABP6P51161 128 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 PLP2Q04941 152 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 SMIM21Q3B7S5 101 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF718Q3SXZ3 478 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 IBA57Q5T440 356 aaKnown RBP13.35□□□□□ -0.27
CCDC8-201ENST00000307522 MOB3BQ86TA1 216 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 TNFRSF19Q9NS68 423 aa13.35□□□□□ -0.27
CCDC8-201ENST00000307522 C2orf70A6NJV1 201 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 CXorf1O96002 111 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 STAG3L2P0CL84 134 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 STAG3L3P0CL85 134 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 FOXC1Q12948 553 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 C19orf35Q6ZS72 473 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 SMIM12Q96EX1 92 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 CSN3P07498 182 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF137PP52743 207 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 Q6ZSR3 168 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 OR5B3Q8NH48 314 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 NANOS1Q8WY41 292 aaKnown RBP13.34□□□□□ -0.27
CCDC8-201ENST00000307522 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 MYOD1P15172 320 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 ZNF826PQ6ZT77 177 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 TMEM178AQ8NBL3 297 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 GGTLC1Q9BX51 225 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 WDR83OSQ9Y284 106 aa13.34□□□□□ -0.27
CCDC8-201ENST00000307522 TRAV3A0A0B4J244 114 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 LINC00473A8K010 186 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 H3BUT2 72 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 PCBD1P61457 104 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 SLC25A34Q6PIV7 304 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 PNKDQ8N490 385 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 C9orf106Q8NAJ2 232 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 TET2Q6N021 2002 aaPredicted RBP13.33□□□□□ -0.28
CCDC8-201ENST00000307522 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 RPL24P83731 157 aaKnown RBP13.33□□□□□ -0.28
CCDC8-201ENST00000307522 EFNB3Q15768 340 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 JMJD8Q96S16 334 aa13.33□□□□□ -0.28
CCDC8-201ENST00000307522 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
CCDC8-201ENST00000307522 BHLHA15Q7RTS1 189 aaPredicted RBP13.32□□□□□ -0.28
CCDC8-201ENST00000307522 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
CCDC8-201ENST00000307522 THYN1Q9P016 225 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms