RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF709Q8N972 641 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 ZNF714Q96N38 554 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 NGBQ9NPG2 151 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 CDKN1AP38936 164 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 ARSJQ5FYB0 599 aaPredicted RBP17.86■□□□□ 0.45
TPM4-201ENST00000300933 CORO2AQ92828 525 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 MRPL20Q9BYC9 149 aaKnown RBP17.86■□□□□ 0.45
TPM4-201ENST00000300933 NCOR1P1Q9H4R4 102 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 CD3EP07766 207 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 THBS3P49746 956 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 ATP6V1FQ16864 119 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 VN1R17PQ8TDU5 208 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 SLC35D1Q9NTN3 355 aa17.86■□□□□ 0.45
TPM4-201ENST00000300933 VSTM5A8MXK1 200 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 NDUFB3O43676 98 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 TFPI2P48307 235 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 MS4A5Q9H3V2 200 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 M0QZK8 103 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 DMRTA1Q5VZB9 504 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 TMEM144Q7Z5S9 345 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 Q8N7P7 452 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 LPAR2Q9HBW0 351 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 ABCA1O95477 2261 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 C15orf61A6NNL5 157 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 SSMEM1Q8WWF3 244 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 RAB9BQ9NP90 201 aa17.85■□□□□ 0.45
TPM4-201ENST00000300933 NAV3Q8IVL0 2385 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 CBLN1P23435 193 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 BRS3P32247 399 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 CDC34P49427 236 aaPredicted RBP17.84■□□□□ 0.45
TPM4-201ENST00000300933 HSPB9Q9BQS6 159 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 IGHV1-69-2A0A0G2JMI3 117 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 APOBEC3AP31941 199 aaPredicted RBP17.84■□□□□ 0.45
TPM4-201ENST00000300933 CA7P43166 264 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 OR5I1Q13606 314 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 MOB3BQ86TA1 216 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 MIEN1Q9BRT3 115 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 GAL3ST2Q9H3Q3 398 aa17.84■□□□□ 0.45
TPM4-201ENST00000300933 LY6DQ14210 128 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 TREML4Q6UXN2 200 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 SFRP2Q96HF1 295 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 LINC00574Q9H8X3 128 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 TP53TG3Q9ULZ0 132 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 CBY1Q9Y3M2 126 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 OR51B2Q9Y5P1 312 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 ITGB1BP1O14713 200 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 KIR2DS2P43631 304 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 PCP4P48539 62 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 LRRC10Q5BKY1 277 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 TPTE2P1Q5T6R2 138 aa17.83■□□□□ 0.44
TPM4-201ENST00000300933 PIEZO1Q92508 2521 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 VWC2Q2TAL6 325 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 AARDQ4LEZ3 155 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 MIC13Q5XKP0 118 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 OR10W1Q8NGF6 305 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 SERF1AO75920 110 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 CA2P00918 260 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 LOXP28300 417 aaPredicted RBP17.82■□□□□ 0.44
TPM4-201ENST00000300933 MLANAQ16655 118 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.82■□□□□ 0.44
TPM4-201ENST00000300933 OR10X1Q8NGY0 326 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 TMEM14BQ9NUH8 114 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 WDR83OSQ9Y284 106 aa17.82■□□□□ 0.44
TPM4-201ENST00000300933 F2Z2F3 143 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 HSPE1P61604 102 aaKnown RBP17.81■□□□□ 0.44
TPM4-201ENST00000300933 TRBV20OR9-2A0A075B6H5 130 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 IGHV3-72A0A0B4J1Y9 119 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 MDFIC2A0A1B0GVS7 189 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 TNFRSF13BO14836 293 aaPredicted RBP17.81■□□□□ 0.44
TPM4-201ENST00000300933 SAA1P0DJI8 122 aaPredicted RBP17.81■□□□□ 0.44
TPM4-201ENST00000300933 CHRNB4P30926 498 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 LINC00310P59036 64 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 TPPP2P59282 170 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 MUC15Q8N387 334 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 C1orf159Q96HA4 380 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 MGST2Q99735 147 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 VAMP8Q9BV40 100 aa17.81■□□□□ 0.44
TPM4-201ENST00000300933 F6UZH7 168 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 J3QR06 171 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 ADORA2A-AS1P86434 159 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 FOXL1Q12952 345 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 OR52E5Q8NH55 327 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 FAM90A9PA6NNJ1 464 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 PRSS46E5RG02 174 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 KLRB1Q12918 225 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 RTL8BQ17RB0 113 aa17.8■□□□□ 0.44
TPM4-201ENST00000300933 FAM103A1Q9BTL3 118 aaKnown RBP17.8■□□□□ 0.44
TPM4-201ENST00000300933 NPY1RP25929 384 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 GAGE1Q13065 139 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 TMEM183BQ1AE95 376 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 SLC24A4Q8NFF2 622 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 ENY2Q9NPA8 101 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 E7EUB6 86 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 PDE6DO43924 150 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 CRISP2P16562 243 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 MEF2CQ06413 473 aaPredicted RBP17.79■□□□□ 0.44
TPM4-201ENST00000300933 TEX43Q6ZNM6 134 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 ADTRPQ96IZ2 230 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 RITA1Q96K30 269 aa17.79■□□□□ 0.44
TPM4-201ENST00000300933 HARBI1Q96MB7 349 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms