RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IGF2-ASQ6U949 168 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 FAM57AQ8TBR7 257 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 ADTRPQ96IZ2 230 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 RAB9BQ9NP90 201 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 RELNP78509 3460 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 DPRXA6NFQ7 191 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 CRYABP02511 175 aaKnown RBP10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRR20EP86478 221 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRR20CP86479 221 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRR20DP86480 221 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRR20BP86481 221 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRR20AP86496 221 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 DIAPH2-AS1Q14236 149 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PSG5Q15238 335 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 RTL8BQ17RB0 113 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 OR9G1Q8NH87 305 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 NEUROG1Q92886 237 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 SLC25A10Q9UBX3 287 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-204ENST00000300862 Q9UFV3 132 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 PRNDQ9UKY0 176 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 CHRNB4P30926 498 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 PRCDQ00LT1 54 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 FOXL1Q12952 345 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 ADIPOQQ15848 244 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 TPTE2P1Q5T6R2 138 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 CMTM2Q8TAZ6 248 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 CCL17Q92583 94 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 GOLT1BQ9Y3E0 138 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 hADV38S2A0JD32 116 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 E7EUB6 86 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 OR10J4P0C629 311 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 BSPH1Q075Z2 132 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 OR5I1Q13606 314 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 TMEM108Q6UXF1 575 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 C1orf122Q6ZSJ8 110 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 OR10G8Q8NGN5 311 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 H1FXQ92522 213 aaKnown RBP10.5□□□□□ -0.73
HIF3A-204ENST00000300862 NABP2Q9BQ15 211 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 C20orf144Q9BQM9 153 aa10.5□□□□□ -0.73
HIF3A-204ENST00000300862 SPTA1P02549 2419 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 TLN1Q9Y490 2541 aaKnown RBP10.49□□□□□ -0.73
HIF3A-204ENST00000300862 HSBP1L1C9JCN9 74 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 FRMD6-AS1P0C7T7 363 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 CDKN1AP38936 164 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 HARBI1Q96MB7 349 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 SLC45A2Q9UMX9 530 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 NBASA2RRP1 2371 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 C16orf97H3BN30 126 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 M0QZK8 103 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 C10orf55Q5SWW7 151 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 TEX36Q5VZQ5 186 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 TMEM200BQ69YZ2 307 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 CORO2AQ92828 525 aa10.49□□□□□ -0.73
HIF3A-204ENST00000300862 C17orf100A8MU93 164 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 OR7C2O60412 319 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 CRYBB3P26998 211 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-204ENST00000300862 GAGE1Q13065 139 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
HIF3A-204ENST00000300862 OR2T6Q8NHC8 308 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF503Q96F45 646 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 ABHD17AQ96GS6 310 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 LINC00312Q9Y6C7 94 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 THBDP07204 575 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 CBLN1P23435 193 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 BRS3P32247 399 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 SELENOTP62341 195 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
HIF3A-204ENST00000300862 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 LPAR2Q9HBW0 351 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF257Q9Y2Q1 563 aa10.48□□□□□ -0.73
HIF3A-204ENST00000300862 NKX6-3A6NJ46 265 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 SERF1AO75920 110 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 RNASE2P10153 161 aaKnown RBP10.47□□□□□ -0.73
HIF3A-204ENST00000300862 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF90Q03938 601 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 KRTCAP3Q53RY4 240 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 ASPHD1Q5U4P2 390 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 NUP37Q8NFH4 326 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 BTF3L4Q96K17 158 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 TXNDC17Q9BRA2 123 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 SAP30LQ9HAJ7 183 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 F2Z2F3 143 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 SPINK4O60575 86 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 COMPP49747 757 aaPredicted RBP10.47□□□□□ -0.73
HIF3A-204ENST00000300862 DLX1P56177 255 aa10.47□□□□□ -0.73
HIF3A-204ENST00000300862 TCF15Q12870 199 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms