RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 TMEM106BQ9NUM4 274 aa11.03□□□□□ -0.64
TTC39B-201ENST00000297615 IDI2-AS1Q9NZ38 188 aa11.03□□□□□ -0.64
TTC39B-201ENST00000297615 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.65
TTC39B-201ENST00000297615 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.65
TTC39B-201ENST00000297615 OR10J1P30954 320 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 ERVFC1-1P60608 527 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
TTC39B-201ENST00000297615 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
TTC39B-201ENST00000297615 TMEM242Q9NWH2 141 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 A0A1B0GV90 55 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 NDUFB3O43676 98 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 NUPR1O60356 82 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 RUSC1-AS1Q66K80 236 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 RNASE6Q93091 150 aaKnown RBP11.02□□□□□ -0.65
TTC39B-201ENST00000297615 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
TTC39B-201ENST00000297615 TSTD3H0UI37 97 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 GCHFRP30047 84 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 GPX4P36969 197 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 TDGF1P3P51864 188 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 ARF6P62330 175 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF788Q6ZQV5 615 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 C15orf61A6NNL5 157 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 CA1P00915 261 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 TNFRSF1AP19438 455 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 IER3P46695 156 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 SUMO1P63165 101 aaKnown RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 CENPVQ7Z7K6 275 aaPredicted RBP11.01□□□□□ -0.65
TTC39B-201ENST00000297615 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
TTC39B-201ENST00000297615 IGHV3-35A0A0C4DH35 117 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 hADV38S2A0JD32 116 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 CXorf1O96002 111 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 RAB31Q13636 194 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 C1orf159Q96HA4 380 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF714Q96N38 554 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 COMMD5Q9GZQ3 224 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
TTC39B-201ENST00000297615 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF729A6NN14 1252 aaPredicted RBP11□□□□□ -0.65
TTC39B-201ENST00000297615 PDE6DO43924 150 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 MOSP00540 346 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 RNF224P0DH78 156 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 GZMBP10144 247 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 MORN5Q5VZ52 161 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 TRAT1Q6PIZ9 186 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 MISP3Q96FF7 219 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 OPRK1P41145 380 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 NBL1P41271 181 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 CNN1P51911 297 aaKnown RBP11□□□□□ -0.65
TTC39B-201ENST00000297615 PRR27Q6MZM9 219 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 PQLC2Q6ZP29 291 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 OR10G8Q8NGN5 311 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF462Q96JM2 2506 aa11□□□□□ -0.65
TTC39B-201ENST00000297615 IGKV1OR2-108A0A075B7D4 117 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 NKX6-3A6NJ46 265 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 STAG3L2P0CL84 134 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 STAG3L3P0CL85 134 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 DDTP30046 118 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 CDKN1AP38936 164 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 RHOBP62745 196 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 KLRD1Q13241 179 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 NABP2Q9BQ15 211 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 PARD6GQ9BYG4 376 aaPredicted RBP10.99□□□□□ -0.65
TTC39B-201ENST00000297615 DSCAML1Q8TD84 2053 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 OR5G3P0C626 314 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 ORM2P19652 201 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 ADMP35318 185 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 RAB7AP51149 207 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 PLGLAQ15195 96 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 BLNKQ8WV28 456 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 C14orf144Q96I85 54 aa10.99□□□□□ -0.65
TTC39B-201ENST00000297615 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 VWC2Q2TAL6 325 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
TTC39B-201ENST00000297615 MRPL54Q6P161 138 aaKnown RBP10.98□□□□□ -0.65
TTC39B-201ENST00000297615 SSBP3Q9BWW4 388 aaPredicted RBP10.98□□□□□ -0.65
TTC39B-201ENST00000297615 KCNIP2Q9NS61 270 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 RPUSD1Q9UJJ7 312 aaKnown RBP10.98□□□□□ -0.65
TTC39B-201ENST00000297615 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 TEX50A0A1B0GTY4 177 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 F2Z2F3 143 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 K7EN84 100 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 F2RL2O00254 374 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 RTL8BQ17RB0 113 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 LRRC10Q5BKY1 277 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 MRPL36Q9P0J6 103 aaKnown RBP10.98□□□□□ -0.65
TTC39B-201ENST00000297615 IGHV1-69-2A0A0G2JMI3 117 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 SIAH2O43255 324 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 MUC15Q8N387 334 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 ZNF664Q8N3J9 261 aa10.98□□□□□ -0.65
TTC39B-201ENST00000297615 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms