RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 ABHD5Q8WTS1 349 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 OOSP1A8MZH6 123 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 PAGE4O60829 102 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 OR10J1P30954 320 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 IQCF2Q8IXL9 164 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 GATAD1Q8WUU5 269 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 C19orf24Q9BVV8 132 aa17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 FNDC4Q9H6D8 234 aaPredicted RBP17.21■□□□□ 0.35
SNRNP25-201ENST00000293861 HOXB4P17483 251 aaPredicted RBP17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 MINOS1Q5TGZ0 78 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 SPNS3Q6ZMD2 512 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 NANPQ8TBE9 248 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 TXNDC17Q9BRA2 123 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 FBXL15Q9H469 300 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 MINOS1-NBL1R4GNA1 71 aa17.2■□□□□ 0.34
SNRNP25-201ENST00000293861 FOXH1O75593 365 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 ARL14EPLP0DKL9 152 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 LHFPL4Q7Z7J7 247 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 SRSF8Q9BRL6 282 aaKnown RBP17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 SDF2L1Q9HCN8 221 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 SEPSECSQ9HD40 501 aaKnown RBP17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 HILPDAQ9Y5L2 63 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 SSBP2P81877 361 aaPredicted RBP17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 CCDC144NLQ6NUI1 221 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 NPBQ8NG41 125 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 OR2T6Q8NHC8 308 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 PIMREGQ9BSJ6 248 aa17.19■□□□□ 0.34
SNRNP25-201ENST00000293861 ZNF727A8MUV8 499 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 NDUFS8O00217 210 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 NDUFA3O95167 84 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 CRYGCP07315 174 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 ETFRF1Q6IPR1 90 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 THAP8Q8NA92 274 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 OR4F5Q8NH21 305 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 OR4F4Q96R69 305 aa17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 POLR3KQ9Y2Y1 108 aaPredicted RBP17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 USP9XQ93008 2570 aaPredicted RBP17.18■□□□□ 0.34
SNRNP25-201ENST00000293861 TEX22C9J3V5 150 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 MOSP00540 346 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 OR1P1Q8NH06 330 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 FAM168AQ92567 244 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 EPG5Q9HCE0 2579 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 C11orf94C9JXX5 98 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 CORTO00230 105 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 NBR2O15453 112 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 TOX4O94842 621 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 MT-CO2P00403 227 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 MT-ND4LP03901 98 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 REG1AP05451 166 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 FOLR2P14207 255 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 AREGP15514 252 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 CYP2G1PQ6ZSU1 146 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 SRSF12Q8WXF0 261 aaKnown RBP17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 HIST1H2BAQ96A08 127 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 ACY3Q96HD9 319 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 NAT8Q9UHE5 227 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 FUT9Q9Y231 359 aa17.17■□□□□ 0.34
SNRNP25-201ENST00000293861 PDE6DO43924 150 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 GCHFRP30047 84 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 LGALS4P56470 323 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 SPATA31B1PQ5VZV4 182 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 SMIM7Q9BQ49 75 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 TBL2Q9Y4P3 447 aaKnown RBP17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 ZFYVE26Q68DK2 2539 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 FLNCQ14315 2725 aa17.16■□□□□ 0.34
SNRNP25-201ENST00000293861 OR5G3P0C626 314 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 MFAP2P55001 183 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 MMDQ15546 238 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 RNF212Q495C1 297 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 FAM78BQ5VT40 261 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 C10orf105Q8TEF2 133 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 ISOC2Q96AB3 205 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 EAF1Q96JC9 268 aaPredicted RBP17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 F11RQ9Y624 299 aaKnown RBP17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 CXorf65A6NEN9 183 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 FCN1O00602 326 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 OR2C1O95371 312 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 GNB1P62873 340 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 PLGLAQ15195 96 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 OR2T10Q8NGZ9 312 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 NPIPB3Q92617 1050 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 YPEL4Q96NS1 127 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 PARLQ9H300 379 aa17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 SPTAN1Q13813 2472 aaKnown RBP17.15■□□□□ 0.34
SNRNP25-201ENST00000293861 IGKV1D-37A0A075B6S9 117 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 TCRBV4S1A1TA0A5B7 111 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 PSMB11A5LHX3 300 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 F6UZH7 168 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 CLN5O75503 358 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 TSPAN9O75954 239 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 UBE2E1P51965 193 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 SELENOTP62341 195 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 EBI3Q14213 229 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 TBX15Q96SF7 602 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 RNF2Q99496 336 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 TMEM242Q9NWH2 141 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 ARL2-SNX15V9GYD0 113 aa17.14■□□□□ 0.33
SNRNP25-201ENST00000293861 A0A1W2PRD5 423 aa17.13■□□□□ 0.33
SNRNP25-201ENST00000293861 A0A1W2PRF3 423 aa17.13■□□□□ 0.33
SNRNP25-201ENST00000293861 A0A1W2PRM7 423 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms