RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 LOC105371242A0A075B767 164 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 SNCGO76070 127 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 GATAD1Q8WUU5 269 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 CCL13Q99616 98 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 NAA38Q9BRA0 125 aaKnown RBP9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 IGKV1D-43A0A0B4J1Z2 117 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 CEACAM4O75871 244 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 FOXF2Q12947 444 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 TTC9CQ8N5M4 171 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 MBD3L1Q8WWY6 194 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 TRAV30A0A087WSZ9 112 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 WISP1O95388 367 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 PSG1P11464 419 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 YAE1D1Q9NRH1 226 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 TCF19Q9Y242 345 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 H3BTX0 84 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 SELENOTP62341 195 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 OCC1Q8TAD7 63 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 C18orf15Q96N68 181 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 GOSR1O95249 250 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 SELLP14151 372 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 ID3Q02535 119 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 MRPL52Q86TS9 123 aaKnown RBP9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 HEATR5BQ9P2D3 2071 aa9.52□□□□□ -0.89
NPC1L1-201ENST00000289547 IGKV1D-8A0A087WSZ0 117 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 A0A1B0GWJ7 208 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 ODAMA1E959 279 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 IL6RP08887 468 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 C2orf83Q53S99 150 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 GTSF1LQ9H1H1 148 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 FBLN5Q9UBX5 448 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 ZFHX2Q9C0A1 2572 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 HSPE1P61604 102 aaKnown RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 LCN12Q6JVE5 192 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 POLR3KQ9Y2Y1 108 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 CEP250Q9BV73 2442 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 MPV17L2Q567V2 206 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 HIGD1AQ9Y241 93 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 DIDO1Q9BTC0 2240 aaKnown RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 SRCAPQ6ZRS2 3230 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 SDK2Q58EX2 2172 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 COX6CP09669 75 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 CDKN1AP38936 164 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 HIST1H1AQ02539 215 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 SPANXN1Q5VSR9 72 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 SSBP4Q9BWG4 385 aaPredicted RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
NPC1L1-201ENST00000289547 C17orf100A8MU93 164 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 J3KRW8 73 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 MGPP08493 103 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 FANCMQ8IYD8 2048 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 THBDP07204 575 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 VKORC1L1Q8N0U8 176 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 GCSAMQ8N6F7 178 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 INSIG2Q9Y5U4 225 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 PPIAL4CA0A0B4J2A2 164 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 LYPD3O95274 346 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 PPIAL4GP0DN37 164 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 TMEM160Q9NX00 188 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 FREM3P0C091 2139 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 GAGE12BA1L429 117 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 OR11H12B2RN74 326 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 ACTL10Q5JWF8 245 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 NHP2Q9NX24 153 aaKnown RBP9.5□□□□□ -0.89
NPC1L1-201ENST00000289547 A0A0A6YYD4 124 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 CD55P08174 381 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 REG1BP48304 166 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 RND2P52198 227 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 MBNL2Q5VZF2 373 aaKnown RBP9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 IGFL2Q6UWQ7 119 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 SAXO1Q8IYX7 474 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 NEUROG1Q92886 237 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 ANAPC13Q9BS18 74 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 PTPRSQ13332 1948 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 TRAV1-1A0A0B4J248 108 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 TSPOP30536 169 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 RPL8P62917 257 aaKnown RBP9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 RNFT1Q5M7Z0 435 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
NPC1L1-201ENST00000289547 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms