RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 MBD3L4A6NDZ8 208 aaPredicted RBP16.84■□□□□ 0.29
USP25-202ENST00000285681 MBD3L3A6NE82 208 aaPredicted RBP16.84■□□□□ 0.29
USP25-202ENST00000285681 MBD3L5A6NJ08 208 aaPredicted RBP16.84■□□□□ 0.29
USP25-202ENST00000285681 IGKV1D-12P01611 117 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 WNT2P09544 360 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 ST6GALNAC3Q8NDV1 305 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 MBD3L2Q8NHZ7 208 aaPredicted RBP16.84■□□□□ 0.29
USP25-202ENST00000285681 KIF26BQ2KJY2 2108 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 H3BVH4 76 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 PRSS2P07478 247 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 PVRIGQ6DKI7 326 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 C18orf12Q96KH6 178 aa16.84■□□□□ 0.29
USP25-202ENST00000285681 RPUSD1Q9UJJ7 312 aaKnown RBP16.84■□□□□ 0.29
USP25-202ENST00000285681 RAMP3O60896 148 aa16.83■□□□□ 0.29
USP25-202ENST00000285681 LGALS3P17931 250 aaKnown RBP16.83■□□□□ 0.29
USP25-202ENST00000285681 TNFRSF18Q9Y5U5 241 aa16.83■□□□□ 0.29
USP25-202ENST00000285681 GAS1P54826 345 aa16.83■□□□□ 0.29
USP25-202ENST00000285681 OR4D5Q8NGN0 318 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 DPH3Q96FX2 82 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 COX6CP09669 75 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 ZNF324BQ6AW86 544 aaPredicted RBP16.83■□□□□ 0.28
USP25-202ENST00000285681 FOLR2P14207 255 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 FMC1Q96HJ9 113 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 LINC01587Q99440 93 aa16.83■□□□□ 0.28
USP25-202ENST00000285681 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
USP25-202ENST00000285681 OR9G9P0C7N8 305 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 ZNF25P17030 456 aaPredicted RBP16.82■□□□□ 0.28
USP25-202ENST00000285681 CIRBPQ14011 172 aaKnown RBP16.82■□□□□ 0.28
USP25-202ENST00000285681 ZNF385CQ66K41 422 aaPredicted RBP16.82■□□□□ 0.28
USP25-202ENST00000285681 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 C8orf46Q8TAG6 207 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 ADIPOQQ15848 244 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 Q9H3A6 140 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 THSD7BQ9C0I4 1608 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 SBF1O95248 1867 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 IGHG3P01860 377 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 RNF125Q96EQ8 232 aa16.82■□□□□ 0.28
USP25-202ENST00000285681 FAM209BQ5JX69 171 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
USP25-202ENST00000285681 KLHDC3Q9BQ90 382 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 SCO2A0A1W2PP80 73 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 SELLP14151 372 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 A0A0A6YYD4 124 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 TMEM178BH3BS89 294 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 PRCDQ00LT1 54 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 PPP1R17O96001 155 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 MEIG1Q5JSS6 88 aa16.81■□□□□ 0.28
USP25-202ENST00000285681 HEPN1Q6WQI6 88 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 SLC50A1Q9BRV3 221 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 CBY1Q9Y3M2 126 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 IGHV2-26A0A0B4J1V2 119 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 ATP5G3P48201 142 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 PSMB11A5LHX3 300 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 H7C2G1 150 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 PAX1P15863 534 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 EFNB1P98172 346 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 IFITM2Q01629 132 aa16.8■□□□□ 0.28
USP25-202ENST00000285681 MYO7BQ6PIF6 2116 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 TRAV14DV4A0A0A6YYC5 116 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 RNF222A6NCQ9 220 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 LDLRAD2Q5SZI1 272 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 FBLL1A6NHQ2 334 aaKnown RBP16.79■□□□□ 0.28
USP25-202ENST00000285681 RNASE4P34096 147 aaKnown RBP16.79■□□□□ 0.28
USP25-202ENST00000285681 SPATA45Q537H7 98 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 ABCA4P78363 2273 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 IGKV1D-8A0A087WSZ0 117 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 A0A1B0GUT8 65 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 TCRBV4S1A1TA0A5B7 111 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 B4DSR2 109 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 FOXA3P55318 350 aaPredicted RBP16.79■□□□□ 0.28
USP25-202ENST00000285681 SUMO2P61956 95 aaKnown RBP16.79■□□□□ 0.28
USP25-202ENST00000285681 DIDO1Q9BTC0 2240 aaKnown RBP16.79■□□□□ 0.28
USP25-202ENST00000285681 GRIFINA4D1Z8 144 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 NAT1P18440 290 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 CBLN1P23435 193 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 REC114Q7Z4M0 266 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 CACNA1HO95180 2353 aa16.79■□□□□ 0.28
USP25-202ENST00000285681 B3GALT5-AS1P59052 145 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 TMEM101Q96IK0 257 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 SDF2L1Q9HCN8 221 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 OTORQ9NRC9 128 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 C7orf71A4D174 169 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 TAS2R60P59551 318 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 TMEM136Q6ZRR5 245 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 COPS9Q8WXC6 57 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 SMIM12Q96EX1 92 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 FAM90A9PA6NNJ1 464 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 IGHV1-8P0DP01 117 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 OTX1P32242 354 aaPredicted RBP16.78■□□□□ 0.28
USP25-202ENST00000285681 LRTM2Q8N967 370 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 TMEM167AQ8TBQ9 72 aa16.78■□□□□ 0.28
USP25-202ENST00000285681 TRGV2A0A075B6R0 118 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 EMP1P54849 157 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 TMEM200BQ69YZ2 307 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 PRELID3AQ96N28 172 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 GFI1Q99684 422 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 ZMAT5Q9UDW3 170 aaKnown RBP16.77■□□□□ 0.28
USP25-202ENST00000285681 SLC17A3O00476 420 aa16.77■□□□□ 0.28
USP25-202ENST00000285681 RPLP1P05386 114 aaKnown RBP16.77■□□□□ 0.28
USP25-202ENST00000285681 VMO1Q7Z5L0 202 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms