RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PRSS8Q16651 343 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 ATP5SQ99766 215 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
SSRP1-201ENST00000278412 POLR3KQ9Y2Y1 108 aaPredicted RBP9.33□□□□□ -0.92
SSRP1-201ENST00000278412 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 PLGLAQ15195 96 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 PLEKHA3Q9HB20 300 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 BAHCC1Q9P281 2608 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 SMCO3A2RU48 225 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 AP4M1O00189 453 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 JTBO76095 146 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 ELLP55199 621 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 LY6EQ16553 131 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 ARSJQ5FYB0 599 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 GCSAMLQ5JQS6 135 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 ETV3LQ6ZN32 361 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 SSX7Q7RTT5 188 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 PPP1R27Q86WC6 154 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 GINS3Q9BRX5 216 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 TNFRSF19Q9NS68 423 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 UQCC1Q9NVA1 299 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 S4R3C0 116 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 TEP1Q99973 2627 aaKnown RBP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 FAM90A9PA6NNJ1 464 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 B4DSR2 109 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 MED6O75586 246 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 MT-ND4LP03901 98 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 IGHV4-31P0DP07 118 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 VMA21Q3ZAQ7 101 aa9.32□□□□□ -0.92
SSRP1-201ENST00000278412 TAF15Q92804 592 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSRP1-201ENST00000278412 IGLC7A0M8Q6 106 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 TAAR5O14804 337 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 HMGB3O15347 200 aaKnown RBP9.31□□□□□ -0.92
SSRP1-201ENST00000278412 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
SSRP1-201ENST00000278412 NPY1RP25929 384 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 RAB5CP51148 216 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 PYY3Q5JQD4 70 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 PIFOQ8TCI5 191 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 PINX1Q96BK5 328 aaKnown RBP9.31□□□□□ -0.92
SSRP1-201ENST00000278412 HRH4Q9H3N8 390 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 PRDM13Q9H4Q3 707 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 TCAPO15273 167 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 MOSP00540 346 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 SLC25A16P16260 332 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 CEACAM3P40198 252 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 TAS2R30P59541 319 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 BAXQ07812 192 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 PDLIM3Q53GG5 364 aaPredicted RBP9.31□□□□□ -0.92
SSRP1-201ENST00000278412 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 OR2G3Q8NGZ4 309 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 OR52E5Q8NH55 327 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 OR2T6Q8NHC8 308 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 HSPB9Q9BQS6 159 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 HIPK2Q9H2X6 1198 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
SSRP1-201ENST00000278412 TEX22C9J3V5 150 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 NBR2O15453 112 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 GATA2P23769 480 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-201ENST00000278412 LGALS7P47929 136 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 SLC25A24Q6NUK1 477 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 OR10P1Q8NGE3 313 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 SSMEM1Q8WWF3 244 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 P2RX4Q99571 388 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-201ENST00000278412 FNDC4Q9H6D8 234 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-201ENST00000278412 LINC00527Q9UJ94 153 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 IGKV1OR2-108A0A075B7D4 117 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 BORCS7-ASMTA0A0B4J1R7 106 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 TMEM11P17152 192 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 CD1BP29016 333 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 PCP4P48539 62 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 TREM1Q9NP99 234 aa9.3□□□□□ -0.92
SSRP1-201ENST00000278412 BEX4Q9NWD9 120 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-201ENST00000278412 COMPP49747 757 aaPredicted RBP9.29□□□□□ -0.92
SSRP1-201ENST00000278412 CCL20P78556 96 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 ACSM6Q6P461 480 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 IL34Q6ZMJ4 242 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 Q6ZRG5 221 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 Q6ZS46 218 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 Q8N6K4 173 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 SRSF12Q8WXF0 261 aaKnown RBP9.29□□□□□ -0.92
SSRP1-201ENST00000278412 MALSU1Q96EH3 234 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
SSRP1-201ENST00000278412 ENY2Q9NPA8 101 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 PIGBOS1A0A0B4J2F0 54 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 HIST1H1BP16401 226 aaKnown RBP9.29□□□□□ -0.92
SSRP1-201ENST00000278412 FGF7P21781 194 aa9.29□□□□□ -0.92
SSRP1-201ENST00000278412 ZNF616Q08AN1 781 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 259.4 ms