RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TRAV41A0A0B4J266 112 aa16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 TRBV5-5A0A0J9YX44 114 aa16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 PAX4O43316 350 aa16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 LSM4Q9Y4Z0 139 aaKnown RBP16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 SDHCQ99643 169 aaPredicted RBP16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 PINLYPA6NC86 204 aa16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 F8WEM9 126 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 A0A1W2PR77 199 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 H3BUX3 64 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM209AQ5JX71 171 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 TCF23Q7RTU1 214 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 COL22A1Q8NFW1 1626 aaPredicted RBP16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 ZNF708P17019 499 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 ZNF345Q14585 488 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 OR10W1Q8NGF6 305 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 HIST1H2BAQ96A08 127 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 PLPPR1Q8TBJ4 325 aa16.98■□□□□ 0.31
CACNA1B-201ENST00000277549 TMEM8BA6NDV4 472 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 OR2K2Q8NGT1 345 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 IGHV1-18A0A0C4DH31 117 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 A0A0G2JK05 382 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 RAMP3O60896 148 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 DUSP14O95147 198 aaKnown RBP16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 LINC00477Q96M19 166 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A10PA6NDY2 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A18PA6NE21 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A16PA6NEW6 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A20PA6NIJ5 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A8PA6NJQ4 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A7PA6NKC0 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A22PA8MWA6 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A12PA8MX19 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A5PA8MXJ8 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A23PA8MXZ1 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FCN3O75636 299 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A15PP0C7V4 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A13PP0C7W8 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A14PP0C7W9 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 FAM90A24PP0C7X0 464 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 SP5Q6BEB4 398 aaPredicted RBP16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 OSR1Q8TAX0 266 aaPredicted RBP16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 SLC25A2Q9BXI2 301 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 A0A1B0GUT8 65 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 COX5BP10606 129 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 CD300EQ496F6 205 aaPredicted RBP16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 C1orf122Q6ZSJ8 110 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 TMEM133Q9H2Q1 129 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 CHTOPQ9Y3Y2 248 aaKnown RBP16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 SCN8AQ9UQD0 1980 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 POC1AQ8NBT0 407 aa16.97■□□□□ 0.31
CACNA1B-201ENST00000277549 ADAMTSL3P82987 1691 aa16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 RUSC1-AS1Q66K80 236 aa16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 LINC00312Q9Y6C7 94 aa16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 C19orf24Q9BVV8 132 aa16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 CEACAM8P31997 349 aaPredicted RBP16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
CACNA1B-201ENST00000277549 TRGV11A0A075B6L2 103 aa16.96■□□□□ 0.3
CACNA1B-201ENST00000277549 HIGD1CA8MV81 97 aa16.96■□□□□ 0.3
CACNA1B-201ENST00000277549 SUMO4Q6EEV6 95 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 DPRXA6NFQ7 191 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 STPG2Q8N412 459 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 Q96MF0 132 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 A0A096LPF7 62 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 Q0VFX4 171 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 RNF125Q96EQ8 232 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 COQ2Q96H96 371 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 SLC25A39Q9BZJ4 359 aaPredicted RBP16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 CCDC88CQ9P219 2028 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 FAM90A26D6RGX4 464 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 CD55P08174 381 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 C2orf68Q2NKX9 166 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 TMEM249Q2WGJ8 235 aa16.95■□□□□ 0.3
CACNA1B-201ENST00000277549 SMIM6P0DI80 62 aa16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 TDRD15B5MCY1 1934 aaKnown RBP16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 TOMM40O96008 361 aa16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 PIP4P2Q8N4L2 257 aa16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 IRF3Q14653 427 aa16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 TMEM86BQ8N661 226 aa16.94■□□□□ 0.3
CACNA1B-201ENST00000277549 TRAV5A0A0B4J249 113 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 NPIPB13A6NJU9 1138 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 NPIPB5A8MRT5 1133 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 GCM2O75603 506 aaPredicted RBP16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 ZNF672Q499Z4 452 aaPredicted RBP16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 GATAD1Q8WUU5 269 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 DEPPQ9NTK1 212 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 ASXL3Q9C0F0 2248 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 F5H768 121 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 SLC25A38Q96DW6 304 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 ICE1Q9Y2F5 2266 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 MESP1Q9BRJ9 268 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 GZMMP51124 257 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 ZNF525Q8N782 197 aa16.93■□□□□ 0.3
CACNA1B-201ENST00000277549 GGTLC3B5MD39 225 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 RIPPLY2Q5TAB7 128 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 ORMDL3Q8N138 153 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 FNDC4Q9H6D8 234 aaPredicted RBP16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 PIKFYVEQ9Y2I7 2098 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms