RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 PIGYQ3MUY2 71 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 ZNF703Q9H7S9 590 aaPredicted RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 SCN7AQ01118 1682 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 COL9A1P20849 921 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 SLC25A28Q96A46 364 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 H3BMM0 161 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 EREGO14944 169 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 ZP1P60852 638 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 LY6EQ16553 131 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 STHQ8IWL8 128 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 UBE2WQ96B02 151 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 RPP25Q9BUL9 199 aaKnown RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 MBNL2Q5VZF2 373 aaKnown RBP11.31□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 FRRS1LQ9P0K9 344 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
PRDM16-201ENST00000270722 C3AR1Q16581 482 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 HCP5Q6MZN7 132 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 TRBV20OR9-2A0A075B6H5 130 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 M0R2P5 195 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 BGLAPP02818 100 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 TDGF1P3P51864 188 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 IGKV3OR2-268A0A0C4DH90 116 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 CD5LO43866 347 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 DOCK4Q8N1I0 1966 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 SOCS1O15524 211 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 CXCL2P19875 107 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRDM16-201ENST00000270722 CIARTQ8N365 385 aaPredicted RBP11.3□□□□□ -0.6
PRDM16-201ENST00000270722 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
PRDM16-201ENST00000270722 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 PILRBQ9UKJ0 227 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 LINC01587Q99440 93 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 ZNF721Q8TF20 911 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 KLHDC3Q9BQ90 382 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 LEPP41159 167 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 UTF1Q5T230 341 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
PRDM16-201ENST00000270722 NDUFB4O95168 129 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 CD69Q07108 199 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
PRDM16-201ENST00000270722 F8WEM9 126 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 CT62P0C5K7 136 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 GNG5P63218 68 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
PRDM16-201ENST00000270722 OR11H4Q8NGC9 324 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
PRDM16-201ENST00000270722 PRR14LQ5THK1 2151 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 CACNG8Q8WXS5 425 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 NRN1Q9NPD7 142 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 DOCK5Q9H7D0 1870 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 PSG4Q00888 419 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 ASPHD2Q6ICH7 369 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
PRDM16-201ENST00000270722 KLF14Q8TD94 323 aaPredicted RBP11.28□□□□□ -0.6
PRDM16-201ENST00000270722 A0A0J9YW62 118 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 ZNF488Q96MN9 340 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 ASCL2Q99929 193 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 EFNB1P98172 346 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
PRDM16-201ENST00000270722 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms