RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 USF1P22415 310 aaPredicted RBP22.42■■□□□ 1.18
CBX4-201ENST00000269397 Q6ZN92 141 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 C11orf42Q8N5U0 333 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 STPG4Q8N801 248 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 IGF2BP2-AS1Q96M15 143 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 SMIM27A0A1W2PRY6 76 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 HYPMO75409 117 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 CD59P13987 128 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 PPOXP50336 477 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 HES3Q5TGS1 186 aa22.42■■□□□ 1.18
CBX4-201ENST00000269397 SNRNP40Q96DI7 357 aaKnown RBP22.42■■□□□ 1.18
CBX4-201ENST00000269397 CHRNB4P30926 498 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 TEX50A0A1B0GTY4 177 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 DPRXA6NFQ7 191 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 IGHV3-48P01763 117 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 PRCDQ00LT1 54 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 MZT1Q08AG7 82 aa22.41■■□□□ 1.18
CBX4-201ENST00000269397 OR2T6Q8NHC8 308 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 ZNF355PQ9NSJ1 428 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 SLC35D1Q9NTN3 355 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 PRNDQ9UKY0 176 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 COLQQ9Y215 455 aaPredicted RBP22.4■■□□□ 1.18
CBX4-201ENST00000269397 TMEM265A0A087WTH1 108 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 HLA-DQA1P01909 254 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 IGLC2P0DOY2 106 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 IGLC3P0DOY3 106 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 C1orf162Q8NEQ5 155 aaPredicted RBP22.4■■□□□ 1.18
CBX4-201ENST00000269397 SLC35E1Q96K37 410 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 SLC25A33Q9BSK2 321 aa22.4■■□□□ 1.18
CBX4-201ENST00000269397 SIAH2O43255 324 aa22.39■■□□□ 1.18
CBX4-201ENST00000269397 ZNF883P0CG24 379 aa22.39■■□□□ 1.18
CBX4-201ENST00000269397 SSBP2P81877 361 aaPredicted RBP22.39■■□□□ 1.18
CBX4-201ENST00000269397 ZNF439Q8NDP4 499 aa22.39■■□□□ 1.18
CBX4-201ENST00000269397 ARL2-SNX15V9GYD0 113 aa22.39■■□□□ 1.18
CBX4-201ENST00000269397 UPK2O00526 184 aa22.39■■□□□ 1.17
CBX4-201ENST00000269397 PYYP10082 97 aa22.39■■□□□ 1.17
CBX4-201ENST00000269397 TAS2R45P59539 299 aa22.39■■□□□ 1.17
CBX4-201ENST00000269397 UBE2L3P68036 154 aaKnown RBP22.39■■□□□ 1.17
CBX4-201ENST00000269397 NAV3Q8IVL0 2385 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 LAMA5O15230 3695 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 M0R1B8 84 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 IGHG3P01860 377 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 C8orf88P0DMB2 117 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 CT45A6P0DMU7 189 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 CT45A5P0DMU8 189 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 CT45A7P0DMV0 189 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 PRRX1P54821 245 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 ZNF331Q9NQX6 463 aaPredicted RBP22.38■■□□□ 1.17
CBX4-201ENST00000269397 ZNF71Q9NQZ8 489 aaPredicted RBP22.38■■□□□ 1.17
CBX4-201ENST00000269397 NKX2-8O15522 239 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 TCF21O43680 179 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 BHLHA15Q7RTS1 189 aaPredicted RBP22.38■■□□□ 1.17
CBX4-201ENST00000269397 FDCSPQ8NFU4 85 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 UQCR10Q9UDW1 63 aa22.38■■□□□ 1.17
CBX4-201ENST00000269397 PRR27Q6MZM9 219 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 C18orf32Q8TCD1 76 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 DNAJC4Q9NNZ3 241 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 GPR6P46095 362 aaPredicted RBP22.37■■□□□ 1.17
CBX4-201ENST00000269397 HNRNPA3P51991 378 aaKnown RBP22.37■■□□□ 1.17
CBX4-201ENST00000269397 Q6ZVH6 145 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 BORCS7Q96B45 105 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 SLC25A2Q9BXI2 301 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 TUBG2Q9NRH3 451 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 TANC2Q9HCD6 1990 aa22.37■■□□□ 1.17
CBX4-201ENST00000269397 IZUMO1RA6ND01 250 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 MFAP2P55001 183 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 CCL13Q99616 98 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 ZFP30Q9Y2G7 519 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 A0A1W2PRE2 83 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 LHBP01229 141 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 LINC00614P0C842 121 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 SAA1P0DJI8 122 aaPredicted RBP22.36■■□□□ 1.17
CBX4-201ENST00000269397 RNASE2P10153 161 aaKnown RBP22.36■■□□□ 1.17
CBX4-201ENST00000269397 C21orf62-AS1Q17RA5 79 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 GDF5OSQ5U4N7 250 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 FAM216BQ8N7L0 139 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 SSBP4Q9BWG4 385 aaPredicted RBP22.36■■□□□ 1.17
CBX4-201ENST00000269397 CLEC7AQ9BXN2 247 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 ROS1P08922 2347 aa22.36■■□□□ 1.17
CBX4-201ENST00000269397 FNDC10F2Z333 226 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 TNXAQ16473 311 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 ZNF436-AS1Q8NC38 126 aaPredicted RBP22.35■■□□□ 1.17
CBX4-201ENST00000269397 FAM167A-AS1Q96KT0 104 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 SGK494Q96LW2 274 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 PLSCR4Q9NRQ2 329 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 C19orf67A6NJJ6 358 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 NDUFB8O95169 186 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 CFHR2P36980 270 aa22.35■■□□□ 1.17
CBX4-201ENST00000269397 LAMTOR2Q9Y2Q5 125 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 SLC25A15Q9Y619 301 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 MAP1BP46821 2468 aaKnown RBP22.34■■□□□ 1.17
CBX4-201ENST00000269397 PLXNB1O43157 2135 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 PRR33A8MZF0 331 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 E7EUB6 86 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 CDX4O14627 284 aaPredicted RBP22.34■■□□□ 1.17
CBX4-201ENST00000269397 SPACA3Q8IXA5 215 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 ADTRPQ96IZ2 230 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 PROCRQ9UNN8 238 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 ZNF257Q9Y2Q1 563 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 SFTPCP11686 197 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms