RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 HLA-DQB1P01920 261 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 C1QL3Q5VWW1 255 aa10.31□□□□□ -0.76
SRRM4-201ENST00000267260 UBE2CO00762 179 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 ZG16O60844 167 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 HOXD3P31249 432 aaPredicted RBP10.3□□□□□ -0.76
SRRM4-201ENST00000267260 PDLIM4P50479 330 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 TMEM170AQ8WVE7 144 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 TNFRSF14Q92956 283 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 VGLL1Q99990 258 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 IGHMP01871 453 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 DRD3P35462 400 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 DLL3Q9NYJ7 618 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 GDF15Q99988 308 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 KLF4O43474 513 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 PPBPP02775 128 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 TGIF1Q15583 401 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 DUSP15Q9H1R2 295 aaPredicted RBP10.3□□□□□ -0.76
SRRM4-201ENST00000267260 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 COX5BP10606 129 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 RCC1LQ96I51 464 aaKnown RBP10.3□□□□□ -0.76
SRRM4-201ENST00000267260 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
SRRM4-201ENST00000267260 LOXL4Q96JB6 756 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 RNF115Q9Y4L5 304 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 SMPXQ9UHP9 88 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 KIAA1549Q9HCM3 1950 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 C1orf100Q5SVJ3 147 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 SCARF2Q96GP6 870 aaPredicted RBP10.29□□□□□ -0.76
SRRM4-201ENST00000267260 GNB1LQ9BYB4 327 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 RPRMQ9NS64 109 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 ITGB1BP1O14713 200 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
SRRM4-201ENST00000267260 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 ZNF818PQ6ZRF7 136 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 PNKDQ8N490 385 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 DPH3P1Q9H4G8 78 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 PRTN3P24158 256 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 PEMTQ9UBM1 199 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 A8MXK9 166 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 MYOD1P15172 320 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 TMEM187Q14656 261 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 C2orf82Q6UX34 121 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 Q96M66 194 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 HAX1O00165 279 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 ITLN1Q8WWA0 313 aa10.29□□□□□ -0.76
SRRM4-201ENST00000267260 IGHV3-72A0A0B4J1Y9 119 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 NPIPB13A6NJU9 1138 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 MOSP00540 346 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
SRRM4-201ENST00000267260 LIMS1P48059 325 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 J3QW42 95 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 KLHDC2Q9Y2U9 406 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 COL18A1P39060 1754 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
SRRM4-201ENST00000267260 MED12LQ86YW9 2145 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 F2Z2F3 143 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 UPK3AO75631 287 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 SPINK2P20155 84 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
SRRM4-201ENST00000267260 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 TRGV3P03979 118 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 ADMP35318 185 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 GATD1Q8NB37 220 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 KLF12Q9Y4X4 402 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 OSR1Q8TAX0 266 aaPredicted RBP10.28□□□□□ -0.76
SRRM4-201ENST00000267260 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
SRRM4-201ENST00000267260 IL11P20809 199 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 JPT2Q9H910 190 aa10.28□□□□□ -0.76
SRRM4-201ENST00000267260 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.76
SRRM4-201ENST00000267260 SLC25A47Q6Q0C1 308 aa10.27□□□□□ -0.76
SRRM4-201ENST00000267260 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.76
SRRM4-201ENST00000267260 CHODLQ9H9P2 273 aa10.27□□□□□ -0.76
SRRM4-201ENST00000267260 ZNF784Q8NCA9 323 aaPredicted RBP10.27□□□□□ -0.77
SRRM4-201ENST00000267260 ZNF385AQ96PM9 386 aaKnown RBP10.27□□□□□ -0.77
SRRM4-201ENST00000267260 IGHV1-45A0A0A0MS14 117 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 PRR32B1ATL7 298 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 B9A039 149 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 PLA2G2FQ9BZM2 168 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 SEPSECSQ9HD40 501 aaKnown RBP10.27□□□□□ -0.77
SRRM4-201ENST00000267260 TRBV5-3A0A0A0MS03 114 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 F8WEM9 126 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 HRKO00198 91 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 CGAP01215 116 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 CELA2BP08218 269 aaPredicted RBP10.27□□□□□ -0.77
SRRM4-201ENST00000267260 NPIPB3Q92617 1050 aa10.27□□□□□ -0.77
SRRM4-201ENST00000267260 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 IFITM2Q01629 132 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
SRRM4-201ENST00000267260 FOXD3Q9UJU5 478 aaPredicted RBP10.26□□□□□ -0.77
SRRM4-201ENST00000267260 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 A0A0G2JMM0 328 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 A0A1W2PPB8 328 aa10.26□□□□□ -0.77
SRRM4-201ENST00000267260 KIR3DP1A8MWS1 328 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms