RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SIAH2O43255 324 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 HGFACQ04756 655 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 FOXL2NBQ6ZUU3 175 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 ANOS1P23352 680 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 GPR183P32249 361 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 RELBQ01201 579 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 BIVMQ86UB2 503 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 WNT10AQ9GZT5 417 aa12.81□□□□□ -0.36
TIMP3-201ENST00000266085 IGHV3-23P01764 117 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 GPX1P07203 203 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 GATA2P23769 480 aaPredicted RBP12.8□□□□□ -0.36
TIMP3-201ENST00000266085 HSPB9Q9BQS6 159 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 OR52E5Q8NH55 327 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 DPRXA6NFQ7 191 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 AMY1AP04745 511 aa12.8□□□□□ -0.36
TIMP3-201ENST00000266085 RPRMLQ8N4K4 120 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 A8MXK9 166 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
TIMP3-201ENST00000266085 SMUG1Q53HV7 270 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 ST6GALNAC3Q8NDV1 305 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 TBX15Q96SF7 602 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
TIMP3-201ENST00000266085 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
TIMP3-201ENST00000266085 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 CARHSP1Q9Y2V2 147 aaKnown RBP12.79□□□□□ -0.36
TIMP3-201ENST00000266085 IGHV3OR16-8A0A075B7F1 116 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 NBL1P41271 181 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 METRNQ9UJH8 293 aa12.79□□□□□ -0.36
TIMP3-201ENST00000266085 MYO18BQ8IUG5 2567 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 TSPOP30536 169 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 SUPT4H1P63272 117 aaKnown RBP12.78□□□□□ -0.36
TIMP3-201ENST00000266085 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 ZNF841Q6ZN19 808 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 PIP4P1Q86T03 277 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 ZNF383Q8NA42 475 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 PRSS33Q8NF86 280 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
TIMP3-201ENST00000266085 IGKV3-15P01624 115 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 CD55P08174 381 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 OR4D5Q8NGN0 318 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 OR1P1Q8NH06 330 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
TIMP3-201ENST00000266085 TMEM178BH3BS89 294 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 PLXNA2O75051 1894 aa12.78□□□□□ -0.36
TIMP3-201ENST00000266085 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.36
TIMP3-201ENST00000266085 C2orf83Q53S99 150 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 CD177Q8N6Q3 437 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 RAX2Q96IS3 184 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 MLNRO43193 412 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 RNF224P0DH78 156 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 SRIP30626 198 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 HIST1H1AQ02539 215 aaPredicted RBP12.77□□□□□ -0.36
TIMP3-201ENST00000266085 TEX45Q8NA69 505 aa12.77□□□□□ -0.36
TIMP3-201ENST00000266085 BTF3P20290 206 aaKnown RBP12.77□□□□□ -0.37
TIMP3-201ENST00000266085 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 MIR17HGQ75NE6 70 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 EFNA4P52798 201 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 QRFPP83859 136 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 OR4C5Q8NGB2 326 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 NEU1Q99519 415 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 VPS25Q9BRG1 176 aa12.77□□□□□ -0.37
TIMP3-201ENST00000266085 TIMM23O14925 209 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 LEPROTL1O95214 131 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 RPL13AP40429 203 aaKnown RBP12.76□□□□□ -0.37
TIMP3-201ENST00000266085 ATP5G3P48201 142 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 DLX1P56177 255 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 IGFL3Q6UXB1 125 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 ELOVL1Q9BW60 279 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 IFITM10A6NMD0 228 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 PEX7O00628 323 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 OR9G9P0C7N8 305 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 CD69Q07108 199 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
TIMP3-201ENST00000266085 LY6HO94772 140 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
TIMP3-201ENST00000266085 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 CLEC19AQ6UXS0 136 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 WDR83OSQ9Y284 106 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 TRBV9A0A0B4J1U6 114 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 SCO2A0A1W2PP80 73 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 NPIPB6E9PJ23 425 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 TRGC1P0CF51 173 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 DUX5Q96PT3 197 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 MAP1LC3AQ9H492 121 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 ZFP30Q9Y2G7 519 aa12.75□□□□□ -0.37
TIMP3-201ENST00000266085 IGHV3-66A0A0C4DH42 116 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 IGHV3-11P01762 117 aa12.74□□□□□ -0.37
TIMP3-201ENST00000266085 PKIAP61925 76 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms