RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 IGHV3OR16-8A0A075B7F1 116 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 C15orf62A8K5M9 175 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 I3L2K1 104 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 FCGR2BP31994 310 aaPredicted RBP7.23□□□□□ -1.25
VPS41-201ENST00000265745 RND3P61587 244 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 HSPE1P61604 102 aaKnown RBP7.23□□□□□ -1.25
VPS41-201ENST00000265745 Q56UQ5 140 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 LAMTOR1Q6IAA8 161 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 MZT2AQ6P582 158 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 LHFPL1Q86WI0 220 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 UBAC2Q8NBM4 344 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 ZNF114Q8NC26 417 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 OR4A16Q8NH70 328 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 MRGPRFQ96AM1 343 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 TXN2Q99757 166 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 NAA50Q9GZZ1 169 aaKnown RBP7.23□□□□□ -1.25
VPS41-201ENST00000265745 SMPXQ9UHP9 88 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
VPS41-201ENST00000265745 A0A0B4J293 547 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 FAM25AB3EWG3 89 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 FAM25CB3EWG5 89 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 FAM25GB3EWG6 89 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 NUPL2O15504 423 aaKnown RBP7.22□□□□□ -1.25
VPS41-201ENST00000265745 ZNF207O43670 478 aaKnown RBP7.22□□□□□ -1.25
VPS41-201ENST00000265745 GABARAPO95166 117 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 CD3DP04234 171 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 SMIM18P0DKX4 95 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 ZNF182P17025 639 aaPredicted RBP7.22□□□□□ -1.25
VPS41-201ENST00000265745 PI3P19957 117 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 MFAP4P55083 255 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 PRCDQ00LT1 54 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 ODF3L2Q3SX64 289 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 RNASE10Q5GAN6 216 aaKnown RBP7.22□□□□□ -1.25
VPS41-201ENST00000265745 OR52I2Q8NH67 350 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 AP3S1Q92572 193 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 ZNF486Q96H40 463 aaPredicted RBP7.22□□□□□ -1.25
VPS41-201ENST00000265745 OR10C1Q96KK4 312 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 ABHD1Q96SE0 405 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 MTFP1Q9UDX5 166 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
VPS41-201ENST00000265745 OR4C46A6NHA9 309 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 INS-IGF2F8WCM5 200 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 CHEK1O14757 476 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 YIF1AO95070 293 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 MT-CO2P00403 227 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 IGKV1-5P01602 117 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 IGHV3-48P01763 117 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 P0C879 139 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 PGAM2P15259 253 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 TBPP20226 339 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 PIGPP57054 158 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
VPS41-201ENST00000265745 RELQ04864 619 aaPredicted RBP7.21□□□□□ -1.26
VPS41-201ENST00000265745 IZUMO4Q1ZYL8 232 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 RNASE12Q5GAN4 147 aaKnown RBP7.21□□□□□ -1.26
VPS41-201ENST00000265745 TEPPQ6URK8 271 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 Q6ZWC4 215 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 ARRDC1Q8N5I2 433 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 OR4D10Q8NGI6 311 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 TERB2Q8NHR7 220 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 TP53RKQ96S44 253 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 RNF2Q99496 336 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 RHPN1-AS1Q9BWJ2 59 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 NXF2Q9GZY0 626 aaKnown RBP7.21□□□□□ -1.26
VPS41-201ENST00000265745 EXTL2Q9UBQ6 330 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 UBQLN2Q9UHD9 624 aa7.21□□□□□ -1.26
VPS41-201ENST00000265745 TRAV14DV4A0A0A6YYC5 116 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 KIR2DL5BA0A0G2JN68 375 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 KIR2DL5BA0A0G2JPC4 375 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 C3orf85A0A1B0GTC6 90 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 UBE2CO00762 179 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 CD74P04233 296 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 CTSDP07339 412 aaPredicted RBP7.2□□□□□ -1.26
VPS41-201ENST00000265745 APOC4P55056 127 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 GPR107Q5VW38 600 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 PVRIGQ6DKI7 326 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 KIR2DL5AQ8N109 375 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 TMEM229BQ8NBD8 167 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 TMEM116Q8NCL8 245 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 C15orf40Q8WUR7 153 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 PINX1Q96BK5 328 aaKnown RBP7.2□□□□□ -1.26
VPS41-201ENST00000265745 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
VPS41-201ENST00000265745 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 ST8SIA3O43173 380 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 SPRY2O43597 315 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 GNG7O60262 68 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 JTBO76095 146 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 ATG12O94817 140 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 BMI1P35226 326 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 SNCAP37840 140 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 SP6Q3SY56 376 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 SPINK9Q5DT21 86 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 FAM90A2PQ658T7 463 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 DUSP18Q8NEJ0 188 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 ZFAND1Q8TCF1 268 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
VPS41-201ENST00000265745 COPZ2Q9P299 210 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms