RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 RHOBP62745 196 aa13.49□□□□□ -0.25
CTCF-201ENST00000264010 C1orf194Q5T5A4 169 aa13.49□□□□□ -0.25
CTCF-201ENST00000264010 J3QR06 171 aa13.49□□□□□ -0.25
CTCF-201ENST00000264010 CNIH1O95406 144 aa13.49□□□□□ -0.25
CTCF-201ENST00000264010 ZNF841Q6ZN19 808 aa13.49□□□□□ -0.25
CTCF-201ENST00000264010 FAM90A9PA6NNJ1 464 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 TFF3Q07654 80 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 PRR31Q5SQ13 230 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 ANAPC16Q96DE5 110 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 ABHD12Q8N2K0 398 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 SSMEM1Q8WWF3 244 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 ZNF714Q96N38 554 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 LRFN3Q9BTN0 628 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 OR9G9P0C7N8 305 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 SRIP30626 198 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 BPIFA4PQ86YQ2 179 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 PMCHL2Q9BQD1 86 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 ARHGAP21Q5T5U3 1957 aa13.48□□□□□ -0.25
CTCF-201ENST00000264010 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 GNB2P62879 340 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 TEPPQ6URK8 271 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 PXMP4Q9Y6I8 212 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 PKDREJQ9NTG1 2253 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
CTCF-201ENST00000264010 A0A087WWC5 75 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 LINC00205P59089 165 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 MUC3AQ02505 3323 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 C17orf100A8MU93 164 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 TAS2R45P59539 299 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 BSPH1Q075Z2 132 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 FXYD3Q14802 87 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 DOLPP1Q86YN1 238 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 HARBI1Q96MB7 349 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
CTCF-201ENST00000264010 UBE2V1Q13404 147 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 PLGLAQ15195 96 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 VMA21Q3ZAQ7 101 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 OR8B3Q8NGG8 313 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 VSTM2AQ8TAG5 236 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 FAM90A27PA6NNH2 459 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 C15orf65H3BRN8 121 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 F2RL2O00254 374 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 SLC17A3O00476 420 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 IGLV2-14P01704 120 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 ZNF137PP52743 207 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 SEM1Q6ZVN7 128 aa13.46□□□□□ -0.25
CTCF-201ENST00000264010 SERTM2A0A1B0GWG4 89 aa13.46□□□□□ -0.26
CTCF-201ENST00000264010 TMEM250H0YL14 139 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 PDE6DO43924 150 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 TCF15Q12870 199 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 FLYWCH2Q96CP2 140 aaKnown RBP13.45□□□□□ -0.26
CTCF-201ENST00000264010 TMEM191AQ9H0A3 160 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 SLC45A2Q9UMX9 530 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 HILPDAQ9Y5L2 63 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 PCSK5Q92824 1860 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
CTCF-201ENST00000264010 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 LCN12Q6JVE5 192 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 POLR3KQ9Y2Y1 108 aaPredicted RBP13.45□□□□□ -0.26
CTCF-201ENST00000264010 CXorf1O96002 111 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 HAPLN4Q86UW8 402 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 LINC00312Q9Y6C7 94 aa13.45□□□□□ -0.26
CTCF-201ENST00000264010 IGLV3-9A0A075B6K5 115 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 A0A0G2JNJ9 132 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 MEF2CQ06413 473 aaPredicted RBP13.44□□□□□ -0.26
CTCF-201ENST00000264010 RPP25LQ8N5L8 163 aaKnown RBP13.44□□□□□ -0.26
CTCF-201ENST00000264010 Q9UFV3 132 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 F11RQ9Y624 299 aaKnown RBP13.44□□□□□ -0.26
CTCF-201ENST00000264010 K7EQM0 130 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 PPIHO43447 177 aaKnown RBP13.44□□□□□ -0.26
CTCF-201ENST00000264010 KBTBD11O94819 623 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 GATA4P43694 442 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 GNG4P50150 75 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 MFAP2P55001 183 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 NUP37Q8NFH4 326 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 WDR83OSQ9Y284 106 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 NMUP48645 174 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 SLC25A34Q6PIV7 304 aa13.44□□□□□ -0.26
CTCF-201ENST00000264010 BMI1P35226 326 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 PRRC2CQ9Y520 2896 aaKnown RBP13.43□□□□□ -0.26
CTCF-201ENST00000264010 H3BUT2 72 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 CA2P00918 260 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 REG1BP48304 166 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 CT45A1Q5HYN5 189 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 CT45A3Q8NHU0 189 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 BLNKQ8WV28 456 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
CTCF-201ENST00000264010 NCOR1P1Q9H4R4 102 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms