RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RAB7AP51149 207 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 GNG5P63218 68 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
CHMP3-201ENST00000263856 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 Q56UQ5 140 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 FAM90A1Q86YD7 464 aa10.14□□□□□ -0.79
CHMP3-201ENST00000263856 BDP1A6H8Y1 2624 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 ADGRG4Q8IZF6 3080 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 TAS2R45P59539 299 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 ERASQ7Z444 233 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 RPRMLQ8N4K4 120 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 COMMD5Q9GZQ3 224 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 CDC42EP3Q9UKI2 254 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 M0QZK8 103 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 HSBP1O75506 76 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 CD24P25063 80 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 KIR2DS2P43631 304 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 CCL8P80075 99 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRR20EP86478 221 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRR20CP86479 221 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRR20DP86480 221 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRR20BP86481 221 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRR20AP86496 221 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 PRB3Q04118 309 aaPredicted RBP10.13□□□□□ -0.79
CHMP3-201ENST00000263856 MZT1Q08AG7 82 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 TMEM136Q6ZRR5 245 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 CORO2AQ92828 525 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 ZNF503Q96F45 646 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 HARBI1Q96MB7 349 aa10.13□□□□□ -0.79
CHMP3-201ENST00000263856 TRGV8A0A0C4DH27 118 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 C9JCJ5 164 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 BMPR1BO00238 502 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 SIAH2O43255 324 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 COX7A2P2O60397 106 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 C3orf79P0CE67 100 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-201ENST00000263856 AREGP15514 252 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 SLAQ13239 276 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 RTL8BQ17RB0 113 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 WDR73Q6P4I2 378 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 H1FXQ92522 213 aaKnown RBP10.12□□□□□ -0.79
CHMP3-201ENST00000263856 SARAFQ96BY9 339 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 KBTBD11-OT1A0A1B0GTJ5 212 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 A0A1W2PN81 502 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 AMY1AP04745 511 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 CX3CL1P78423 397 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 DEFB109BQ30KR1 87 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 ST6GALNAC6Q969X2 333 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 SLC35E1Q96K37 410 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 FOXA2Q9Y261 457 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-201ENST00000263856 PIEZO2Q9H5I5 2752 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 ORM2P19652 201 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 COMPP49747 757 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-201ENST00000263856 TMPRSS3P57727 454 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 TNFAIP6P98066 277 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-201ENST00000263856 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 DDB2Q92466 427 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 PRNDQ9UKY0 176 aa10.12□□□□□ -0.79
CHMP3-201ENST00000263856 TTC28Q96AY4 2481 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 TEX50A0A1B0GTY4 177 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 DPRXA6NFQ7 191 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 M0QZ24 198 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 CDX4O14627 284 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-201ENST00000263856 ZNF324O75467 553 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-201ENST00000263856 C8orf88P0DMB2 117 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 CCL3L1P16619 93 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
CHMP3-201ENST00000263856 TMEM249Q2WGJ8 235 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 RBMXL3Q8N7X1 1067 aaKnown RBP10.11□□□□□ -0.79
CHMP3-201ENST00000263856 OR4B1Q8NGF8 309 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 NEUROG1Q92886 237 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 C11orf52Q96A22 123 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 SFXN3Q9BWM7 321 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 SH3BGRL2Q9UJC5 107 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 FAM90A9PA6NNJ1 464 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 F2RL2O00254 374 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 MOSP00540 346 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 RNF2Q99496 336 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 DMXL1Q9Y485 3027 aa10.11□□□□□ -0.79
CHMP3-201ENST00000263856 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 M0R2Z0 102 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 CORTO00230 105 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 WT1P19544 449 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 COL5A1-AS1Q5SY13 56 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 NPIPB3Q92617 1050 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 MRPL20Q9BYC9 149 aaKnown RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 ENSAO43768 121 aaKnown RBP10.1□□□□□ -0.79
CHMP3-201ENST00000263856 CT45A6P0DMU7 189 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 CT45A5P0DMU8 189 aa10.1□□□□□ -0.79
CHMP3-201ENST00000263856 CT45A7P0DMV0 189 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms