RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ABCA4P78363 2273 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 ZNF253O75346 499 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 IGKV1-16P04430 117 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 CDKN1AP38936 164 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
LIG1-201ENST00000263274 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 PRSS33Q8NF86 280 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TXN2Q99757 166 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
LIG1-201ENST00000263274 C15orf61A6NNL5 157 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 MMP23AO75900 390 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 OR5G3P0C626 314 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TCF15Q12870 199 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TMEM183BQ1AE95 376 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 ZCCHC14Q8WYQ9 949 aaKnown RBP10.39□□□□□ -0.75
LIG1-201ENST00000263274 MIEN1Q9BRT3 115 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 COMMD5Q9GZQ3 224 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TRAV5A0A0B4J249 113 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 LOXL3P58215 753 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 RPL19P84098 196 aaKnown RBP10.39□□□□□ -0.75
LIG1-201ENST00000263274 RAB1CQ92928 201 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 LINC00479Q96M42 142 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
LIG1-201ENST00000263274 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 CD99P14209 185 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 RBX1P62877 108 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 FAM19A2Q8N3H0 131 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 STARD4Q96DR4 205 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 SLC45A2Q9UMX9 530 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 NAV3Q8IVL0 2385 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 PDLIM4P50479 330 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 Q6ZWC4 215 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 TMEM144Q7Z5S9 345 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 ST6GALNAC3Q8NDV1 305 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
LIG1-201ENST00000263274 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
LIG1-201ENST00000263274 ENSAO43768 121 aaKnown RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 WT1P19544 449 aaPredicted RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 RTL8BQ17RB0 113 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 OR2T6Q8NHC8 308 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 SLC35E1Q96K37 410 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 TECRQ9NZ01 308 aaKnown RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 DSCAMO60469 2012 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 UBE2L3P68036 154 aaKnown RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 PRB3Q04118 309 aaPredicted RBP10.37□□□□□ -0.75
LIG1-201ENST00000263274 ERASQ7Z444 233 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 RNF7Q9UBF6 113 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 KBTBD11-OT1A0A1B0GTJ5 212 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 SRIP30626 198 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 BMI1P35226 326 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 CAMPP49913 170 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 FAM27E3Q08E93 113 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 BLNKQ8WV28 456 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 CORO2AQ92828 525 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 GAL3ST2Q9H3Q3 398 aa10.37□□□□□ -0.75
LIG1-201ENST00000263274 ZNF891A8MT65 544 aaPredicted RBP10.36□□□□□ -0.75
LIG1-201ENST00000263274 REG1AP05451 166 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 FAM90A1Q86YD7 464 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 ZNF331Q9NQX6 463 aaPredicted RBP10.36□□□□□ -0.75
LIG1-201ENST00000263274 ZNF586Q9NXT0 402 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 H3BTX0 84 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 CCL25O15444 150 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 TOX4O94842 621 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 KIR2DS2P43631 304 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 RANP62826 216 aaKnown RBP10.36□□□□□ -0.75
LIG1-201ENST00000263274 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 IBA57Q5T440 356 aaKnown RBP10.36□□□□□ -0.75
LIG1-201ENST00000263274 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
LIG1-201ENST00000263274 IGHV3-72A0A0B4J1Y9 119 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 SRRM4A7MD48 611 aaKnown RBP10.35□□□□□ -0.75
LIG1-201ENST00000263274 CCL3L1P16619 93 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 TAS2R45P59539 299 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 STUMQ69YW2 141 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 WFDC8Q8IUA0 241 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 WNT10AQ9GZT5 417 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 DIRC3C9JPN6 131 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 PYYP10082 97 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 C17orf58Q2M2W7 97 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 RBMXL3Q8N7X1 1067 aaKnown RBP10.35□□□□□ -0.75
LIG1-201ENST00000263274 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 ALKBH7Q9BT30 221 aaPredicted RBP10.35□□□□□ -0.75
LIG1-201ENST00000263274 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 COX7A2P2O60397 106 aa10.35□□□□□ -0.75
LIG1-201ENST00000263274 ORM2P19652 201 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms