RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 FCN2Q15485 313 aa12.87□□□□□ -0.35
CHCHD3-201ENST00000262570 RCL1Q9Y2P8 373 aaKnown RBP12.87□□□□□ -0.35
CHCHD3-201ENST00000262570 NUDT19A8MXV4 375 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 SSSCA1O60232 199 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 TMEM50AO95807 157 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 IFNA10P01566 189 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 NPY1RP25929 384 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 ATP5IP56385 69 aaPredicted RBP12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 C8orf86Q6ZUL3 223 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 MFSD2BA6NFX1 497 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 I3L2K1 104 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 K7EIM0 57 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 K7EPK0 472 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 CORTO00230 105 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 RAB32Q13637 225 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 NOXA1Q86UR1 476 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 VN1R17PQ8TDU5 208 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 WDR89Q96FK6 387 aaPredicted RBP12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
CHCHD3-201ENST00000262570 MT-CO2P00403 227 aa12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 PAX9P55771 341 aa12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 EXOSC2Q13868 293 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 Q6ZNX1 250 aa12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 SCARB1Q8WTV0 552 aa12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 SMIM8Q96KF7 97 aa12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 LSM5Q9Y4Y9 91 aaKnown RBP12.85□□□□□ -0.35
CHCHD3-201ENST00000262570 VWFP04275 2813 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 M0QZ24 198 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 TAS2R30P59541 319 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 DEFB136Q30KP8 78 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 RNASEH2CQ8TDP1 164 aaKnown RBP12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 C11orf1Q9H5F2 150 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 PSENENQ9NZ42 101 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 S4R3C0 116 aa12.84□□□□□ -0.35
CHCHD3-201ENST00000262570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 IGHV3-21A0A0B4J1V1 117 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 H3BP45 60 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 S100A10P60903 97 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 SPANXN5Q5MJ07 72 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 ZNF502Q8TBZ5 544 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 PPP1R1CQ8WVI7 109 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 RAX2Q96IS3 184 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 CCDC140Q96MF4 163 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 OR4C12Q96R67 309 aa12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
CHCHD3-201ENST00000262570 CCL24O00175 119 aa12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 IGHV3-23P01764 117 aa12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 FAM209BQ5JX69 171 aa12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 ETV3LQ6ZN32 361 aa12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 RANGRFQ9HD47 186 aaPredicted RBP12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 C21orf62Q9NYP8 219 aa12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
CHCHD3-201ENST00000262570 ANKRD34BA5PLL1 514 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 TSC22D2O75157 780 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 TRBV12-3P01733 135 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 HSPB1P04792 205 aaKnown RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 IFNA4P05014 189 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 MYCNOSP40205 109 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 OPRK1P41145 380 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 RAB11AP62491 216 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 FHL3Q13643 280 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 MLANAQ16655 118 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 DUX3Q96PT4 197 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 ZNF436Q9C0F3 470 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 WNK1Q9H4A3 2382 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 A0A087WW49 117 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 F8W735 103 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 L7N2F9 121 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 DEDDO75618 318 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 TSPAN15O95858 294 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 CLEC3BP05452 202 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 VAMP2P63027 116 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 ZNF616Q08AN1 781 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 TMEM14EPQ6UXP3 125 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 CLEC19AQ6UXS0 136 aa12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
CHCHD3-201ENST00000262570 LINC01619G3V211 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms