RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FAM71F2Q6NXP2 309 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 OR10D4PQ8NGN7 298 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 NEUROG1Q92886 237 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 ASCL2Q99929 193 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 LINC01619G3V211 115 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 SLC25A38Q96DW6 304 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 Q9H3A6 140 aa11.26□□□□□ -0.61
PDGFRB-201ENST00000261799 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 REC114Q7Z4M0 266 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 GTF3AQ92664 365 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 DPRXA6NFQ7 191 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 H7C2G1 150 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 PSPNO60542 156 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 LYZL4Q96KX0 146 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 TRBV6-7A0A0A0MS04 114 aa11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-201ENST00000261799 TMEM218A2RU14 115 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 MLNRO43193 412 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 HEPN1Q6WQI6 88 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 CIARTQ8N365 385 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 FGFBP3Q8TAT2 258 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 FAM131CQ96AQ9 280 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 FAM90A9PA6NNJ1 464 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 RUSC1-AS1Q66K80 236 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 PRELID3AQ96N28 172 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 CXCL3P19876 107 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 CCL1P22362 96 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 MGAMO43451 1857 aa11.24□□□□□ -0.61
PDGFRB-201ENST00000261799 CNTRLQ7Z7A1 2325 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 PEX7O00628 323 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 INSP01308 110 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 CNTFRP26992 372 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 SAA4P35542 130 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 APOC4P55056 127 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 PSMG3Q9BT73 122 aaPredicted RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 TMEM250H0YL14 139 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 TNFSF13O75888 250 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 CHD5Q8TDI0 1954 aa11.23□□□□□ -0.61
PDGFRB-201ENST00000261799 PRB1P04280 392 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 STPG2Q8N412 459 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 A0A1B0GTI1 187 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 UBE2E1P51965 193 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 HBBP68871 147 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 A0A087WX48 190 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 A0A1B0GW15 77 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 TCTAP57738 103 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 ACTL10Q5JWF8 245 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
PDGFRB-201ENST00000261799 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 SLC25A48Q6ZT89 311 aaKnown RBP11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 ZNF250P15622 560 aa11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 ERASQ7Z444 233 aa11.21□□□□□ -0.61
PDGFRB-201ENST00000261799 Q6AWC8 147 aa11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 GHRHP01286 108 aa11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 B3GALT5-AS1P59052 145 aa11.21□□□□□ -0.62
PDGFRB-201ENST00000261799 VPS25Q9BRG1 176 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms